RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 RIBC2Q9H4K1 309 aa12.3□□□□□ -0.44
CTSL-201ENST00000340342 MRPL22Q9NWU5 206 aaKnown RBP12.3□□□□□ -0.44
CTSL-201ENST00000340342 TVP23BQ9NYZ1 205 aa12.3□□□□□ -0.44
CTSL-201ENST00000340342 ASH2LQ9UBL3 628 aa12.3□□□□□ -0.44
CTSL-201ENST00000340342 POLR1DQ9Y2S0 133 aa12.3□□□□□ -0.44
CTSL-201ENST00000340342 TVP23AA6NH52 213 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 H0YJX3 145 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 HLA-DQA2P01906 255 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 HMGN1P05114 100 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 ZNF35P13682 527 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 ALDH3A2P51648 485 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 SLC25A1P53007 311 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 TEKQ02763 1124 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 PLP2Q04941 152 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 KCNMB1Q16558 191 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 KRT80Q6KB66 452 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 PLBD1Q6P4A8 553 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 CORO6Q6QEF8 472 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 LINC00346Q8IVM7 164 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
CTSL-201ENST00000340342 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 PTP4A1Q93096 173 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 HINT3Q9NQE9 182 aaKnown RBP12.29□□□□□ -0.44
CTSL-201ENST00000340342 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 TIMM10BQ9Y5J6 103 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 LHFPL6Q9Y693 200 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 F8P00451 2351 aa12.29□□□□□ -0.44
CTSL-201ENST00000340342 LOC100509620A0A075B734 347 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 IQCMA0A1B0GVH7 501 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SOD3P08294 240 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PSKH1P11801 424 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PAX1P15863 534 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 RPS27P42677 84 aaKnown RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 PCBD1P61457 104 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 LSM6P62312 80 aaKnown RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 ADAM8P78325 824 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 AQP6Q13520 282 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SNAPC1Q16533 368 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SHEQ5VZ18 495 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 TGIF2LYQ8IUE0 185 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 CPOQ8IVL8 374 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 BBS1Q8NFJ9 593 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 OR6K6Q8NGW6 343 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PLEKHA8Q96JA3 519 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 OR51V1Q9H2C8 321 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 CXorf56Q9H5V9 222 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 FAIMQ9NVQ4 179 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 FBXL3Q9UKT7 428 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PRR23D1E9PI22 279 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 RER1O15258 196 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PRKYO43930 277 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 GPRIN2O60269 458 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 DOK2O60496 412 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 DANCRP0C864 163 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PRR23D2P0DMB1 279 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 PAICSP22234 425 aaKnown RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 CCNOP22674 350 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 STOMP27105 288 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 GGT2P36268 569 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 AQP4P55087 323 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SCRN3Q0VDG4 424 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SNTB2Q13425 540 aaKnown RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 LINC01590Q5TEZ4 76 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SLX4IPQ5VYV7 408 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 PRSS57Q6UWY2 283 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 SYT9Q86SS6 491 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 ZNF184Q99676 751 aaPredicted RBP12.28□□□□□ -0.44
CTSL-201ENST00000340342 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 TEX12Q9BXU0 123 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 GSX2Q9BZM3 304 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 GRIP2Q9C0E4 1043 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 WDR76Q9H967 626 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 CA10Q9NS85 328 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 ENOPH1Q9UHY7 261 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 COMMD3-BMI1R4GMX3 469 aa12.28□□□□□ -0.44
CTSL-201ENST00000340342 C5orf49A4QMS7 147 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 SGCEO43556 437 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 CD8AP01732 235 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 FAM157BP0CG42 384 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 NR4A1P22736 598 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 APLNRP35414 380 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 THBS4P35443 961 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 FABP6P51161 128 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 GALK2Q01415 458 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 TBC1D28Q2M2D7 210 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 KLHL12Q53G59 568 aa12.27□□□□□ -0.45
CTSL-201ENST00000340342 CCDC92Q53HC0 331 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms