RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MED12Q93074 2177 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 LOC100289279A0A1B0GTE1 492 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 DVL1O14640 695 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 HS3ST1O14792 307 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 TSPAN12O95859 305 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 GPANK1O95872 356 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 HPNP05981 417 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 CPEP16870 476 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PRPH2P23942 346 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 MPEG1Q2M385 716 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 IGSF11Q5DX21 431 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PGAP1Q75T13 922 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 RTN4RL1Q86UN2 441 aaPredicted RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 MSRB3Q8IXL7 192 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 SIRT6Q8N6T7 355 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OR2AK2Q8NG84 335 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 OR56B1Q8NGI3 324 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 INTS12Q96CB8 462 aaKnown RBP7.95□□□□□ -1.14
RTN3-202ENST00000339997 AKR1E2Q96JD6 320 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 BMFQ96LC9 184 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 PRO1933Q9H354 126 aa7.95□□□□□ -1.14
RTN3-202ENST00000339997 C5orf42Q9H799 3197 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TMED7-TICAM2A0A0A6YYA0 188 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 A0A1W2PNR3 127 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 A6NIZ1 184 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 HCRTR1O43613 425 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 FGF17O60258 216 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 UTS2O95399 124 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 PMS2P2O95744 297 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 HBQ1P09105 142 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 KITLGP21583 273 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 GDF1P27539 372 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 RAP1BP61224 184 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SNRPEP62304 92 aaKnown RBP7.94□□□□□ -1.14
RTN3-202ENST00000339997 RAP1AP62834 184 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 BTG2P78543 158 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TEKQ02763 1124 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 C21orf62-AS1Q17RA5 79 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SP6Q3SY56 376 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 AFMIDQ63HM1 303 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 B3GNTL1Q67FW5 361 aaPredicted RBP7.94□□□□□ -1.14
RTN3-202ENST00000339997 C17orf99Q6UX52 265 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ABI3BPQ7Z7G0 1075 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 VASH2Q86V25 355 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 GABRG1Q8N1C3 465 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ZNF610Q8N9Z0 462 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 DMBX1Q8NFW5 382 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 RXFP4Q8TDU9 374 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ADAMTS18Q8TE60 1221 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TAAR8Q969N4 342 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CMBLQ96DG6 245 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ZNF286AQ9HBT8 521 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 KCNG2Q9UJ96 466 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TMED7Q9Y3B3 224 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 DDAH2O95865 285 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CSF2RBP32927 897 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 HRH1P35367 487 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TAS2R30P59541 319 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ARG2P78540 354 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
RTN3-202ENST00000339997 ARL6IP1Q15041 203 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 NPSR1Q6W5P4 371 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 RNF113BQ8IZP6 322 aaKnown RBP7.94□□□□□ -1.14
RTN3-202ENST00000339997 UBAC2Q8NBM4 344 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 KCNG3Q8TAE7 436 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ISG20Q96AZ6 181 aaKnown RBP7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC25A31Q9H0C2 315 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ARV1Q9H2C2 271 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLCO5A1Q9H2Y9 848 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 A4GALTQ9NPC4 353 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ZFP57Q9NU63 452 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 MED17Q9NVC6 651 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 B4GALT7Q9UBV7 327 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC22A7Q9Y694 548 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 V9GYS6 101 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 IFITM5A6NNB3 132 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TRAPPC2LH3BP13 241 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 AQP7O14520 342 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 WNT1P04628 370 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC6A8P48029 635 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 NPBWR1P48145 328 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CLDN20P56880 219 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ERVK-16P61578 105 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 BTG1P62324 171 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 TGFBR3Q03167 851 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 ARHGAP11BQ3KRB8 267 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SMUG1Q53HV7 270 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 FAM78AQ5JUQ0 283 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC39A5Q6ZMH5 540 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SSX7Q7RTT5 188 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 CCDC190Q86UF4 302 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 OR4C16Q8NGL9 310 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 UPRTQ96BW1 309 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 RSRP1Q9BUV0 290 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 MCOLN1Q9GZU1 580 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 PIGMQ9H3S5 423 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC22A11Q9NSA0 550 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 MARCH5Q9NX47 278 aa7.94□□□□□ -1.14
RTN3-202ENST00000339997 SLC2A8Q9NY64 477 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms