RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 WT1P19544 449 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 CATSPERDQ86XM0 798 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 DNAAF1Q8NEP3 725 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 RNF133Q8WVZ7 376 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 KCTD12Q96CX2 325 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 ADGRG7Q96K78 797 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 TCF7L1Q9HCS4 588 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 ASH2LQ9UBL3 628 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 TBC1D24Q9ULP9 559 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 CEP250Q9BV73 2442 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 A0A1W2PQ09 198 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 SRSF10O75494 262 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 CSF3P09919 207 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 CCR9P51686 369 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 SRYQ05066 204 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 POU4F3Q15319 338 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 AGAP7PQ5VUJ5 663 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 PLXDC2Q6UX71 529 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 STAC2Q6ZMT1 411 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 OR2V1Q8NHB1 315 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 SNRNP27Q8WVK2 155 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 AGAP4Q96P64 663 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 SOSTQ9BQB4 213 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 PPP1R3EQ9H7J1 279 aa19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 GDF2Q9UK05 429 aaPredicted RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 MRPS18CQ9Y3D5 142 aaKnown RBP19.88■□□□□ 0.77
PDLIM2-203ENST00000339162 TMEM269A0A1B0GVZ9 245 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 GPR171O14626 319 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 SLC19A2O60779 497 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 MAS1P04201 325 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 LIPCP11150 499 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 NTF4P34130 210 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 CLDN12P56749 244 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 CUL9Q8IWT3 2517 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 ITFG2Q969R8 447 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 R4GMQ9 66 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 PTPRBP23467 1997 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 SP1P08047 785 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 ADRA2CP18825 462 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 CSRP1P21291 193 aaKnown RBP19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 MAPK3P27361 379 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 PLGLB1Q02325 96 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 SGCAQ16586 387 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 TMEM123Q8N131 208 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 OR4M1Q8NGD0 313 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 PRRX2Q99811 253 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 SLC6A15Q9H2J7 730 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 C1orf198Q9H425 327 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 ZCCHC4Q9H5U6 513 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 B4GALT7Q9UBV7 327 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 ADAM30Q9UKF2 790 aa19.87■□□□□ 0.77
PDLIM2-203ENST00000339162 KIAA1549Q9HCM3 1950 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 OR5H15A6NDH6 313 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 RER1O15258 196 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 TMPRSS7Q7RTY8 843 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 G6PC2Q9NQR9 355 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 A0A0G2JMP0 313 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 A0A0X1KG70 313 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 TM4SF5O14894 197 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF432O94892 652 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 CEACAM1P13688 526 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 SLC25A25Q6KCM7 469 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 GDPD3Q7L5L3 318 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 LRRC28Q86X40 367 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 TMEM251Q8N6I4 163 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 GDPD1Q8N9F7 314 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 MDS2Q8NDY4 140 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 OR4M2Q8NGB6 313 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 OR2AJ1Q8NGZ0 328 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF671Q8TAW3 534 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF837Q96EG3 531 aaPredicted RBP19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 RBM24Q9BX46 236 aaKnown RBP19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 OR52A1Q9UKL2 312 aa19.86■□□□□ 0.77
PDLIM2-203ENST00000339162 TRBV5-7A0A0A0MS05 114 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 MEOX1P50221 254 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 Q8N402 240 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 TMEM54Q969K7 222 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 MFRPQ9BY79 579 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 CYSLTR2Q9NS75 346 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 N6AMT1Q9Y5N5 214 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 CSAG2Q9Y5P2 127 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 FLVCR1Q9Y5Y0 555 aa19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 PTPRZ1P23471 2315 aaPredicted RBP19.85■□□□□ 0.77
PDLIM2-203ENST00000339162 FUOMA2VDF0 154 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 IFITM5A6NNB3 132 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 ZNF716A6NP11 495 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 ITGB2P05107 769 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 HPNP05981 417 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 CCL11P51671 97 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 DEFA1P59665 94 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 DEFA3P59666 94 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 MINDY2Q8NBR6 621 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 LGALS14Q8TCE9 139 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 SLITRK2Q9H156 845 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 DLL3Q9NYJ7 618 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 V9GY05 133 aa19.84■□□□□ 0.77
PDLIM2-203ENST00000339162 URB1O60287 2271 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms