RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 BCL2L10Q9HD36 194 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 RTTNQ86VV8 2226 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 C7orf77A4D0Y5 90 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ADIRFQ15847 76 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 GUK1Q16774 197 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 TFAP2EQ6VUC0 442 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 TSEN54Q7Z6J9 526 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF683Q8IZ20 524 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 FAM181AQ8N9Y4 354 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 OR2G2Q8NGZ5 317 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 SLC2A12Q8TD20 617 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 MALSU1Q96EH3 234 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 SLCO1C1Q9NYB5 712 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 KCNG2Q9UJ96 466 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 EDDM13A0A1B0GTR0 161 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 F11P03951 625 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 BCL6P41182 706 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 H2BFSP57053 126 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 TRA2BP62995 288 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 GLO1Q04760 184 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ABHD17CQ6PCB6 329 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 CPEB1Q9BZB8 566 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 NXF5Q9H1B4 397 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 WDR76Q9H967 626 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF346Q9UL40 294 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 CCL26Q9Y258 94 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 NUDT19A8MXV4 375 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ADAP1O75689 374 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ASCL1P50553 236 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 CRYBA2P53672 197 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 MLF1P58340 268 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 IKZF1Q13422 519 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF770Q6IQ21 691 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 MAMDC2Q7Z304 686 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 DEFB119Q8N690 84 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 MORN4Q8NDC4 146 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SAMD10Q9BYL1 202 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 PIKFYVEQ9Y2I7 2098 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 CDC14CA4D256 554 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SEMG1P04279 462 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 EN2P19622 333 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 RPL7L1Q6DKI1 246 aaKnown RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 INSM2Q96T92 566 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ADGRL4Q9HBW9 690 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 EXOGQ9Y2C4 368 aaKnown RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 IGLV3-27P01718 113 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SLC2A1P11166 492 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 NID1P14543 1247 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 GNB3P16520 340 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 DHPSP49366 369 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 MAT1AQ00266 395 aaKnown RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 FIGLAQ6QHK4 219 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 IL34Q6ZMJ4 242 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF610Q8N9Z0 462 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SPSB2Q99619 263 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 SEMA6CQ9H3T2 930 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 TLX3O43711 291 aaPredicted RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 LILRB5O75023 590 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 HPP00738 406 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 RPS15AP62244 130 aaKnown RBP12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF542PQ5EBM4 170 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM244Q5VVB8 128 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 LHX8Q68G74 356 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 NRSN1Q8IZ57 195 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 OR5D14Q8NGL3 314 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 ADOQ96SZ5 270 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 NMNAT2Q9BZQ4 307 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 OR51M1Q9H341 326 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 OPA3Q9H6K4 179 aa12.06□□□□□ -0.48
COL2A1-201ENST00000337299 RAD51DO75771 328 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 IFNA1P01562 189 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 CD14P08571 375 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 TESK1Q15569 626 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 EOGTQ5NDL2 527 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ANGPTL5Q86XS5 388 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF695Q8IW36 515 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 C17orf78Q8N4C9 275 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 HSD17B8Q92506 261 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 SYT3Q9BQG1 590 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 JTBO76095 146 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 CNOT4O95628 575 aaKnown RBP12.05□□□□□ -0.48
COL2A1-201ENST00000337299 MYOGP15173 224 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 RAB5AP20339 215 aa12.05□□□□□ -0.48
COL2A1-201ENST00000337299 RPL29P47914 159 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms