RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RER1O15258 196 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SELLP14151 372 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 NPR2P20594 1047 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SSR4P51571 173 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ASAH1Q13510 395 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SGCAQ16586 387 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ISXQ2M1V0 245 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ATAD3CQ5T2N8 411 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 BCL2L15Q5TBC7 163 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 UEVLDQ8IX04 471 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF565Q8N9K5 539 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 STK35Q8TDR2 534 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SLC25A38Q96DW6 304 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF385AQ96PM9 386 aaKnown RBP11.22□□□□□ -0.61
LIMK1-201ENST00000336180 RNF121Q9H920 327 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 PLSCR3Q9NRY6 295 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-201ENST00000336180 TCFL5Q9UL49 500 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 FLVCR2Q9UPI3 526 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ALG5Q9Y673 324 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 SLC19A2O60779 497 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 GIFP27352 417 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 EMC4Q5J8M3 183 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 TMEM255AQ5JRV8 349 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 CFAP77Q6ZQR2 320 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 PPP1R32Q7Z5V6 425 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 NAA40Q86UY6 237 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
LIMK1-201ENST00000336180 PROK2Q9HC23 129 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 NUDT15Q9NV35 164 aa11.22□□□□□ -0.61
LIMK1-201ENST00000336180 C9orf172C9J069 976 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 CDX4O14627 284 aaPredicted RBP11.21□□□□□ -0.61
LIMK1-201ENST00000336180 PRKAR1AP10644 381 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 SRYQ05066 204 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 RTN4RL2Q86UN3 420 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 PLCZ1Q86YW0 608 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.21□□□□□ -0.61
LIMK1-201ENST00000336180 OR10Z1Q8NGY1 313 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 MFSD8Q8NHS3 518 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 TTC9Q92623 222 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 CCDC120Q96HB5 630 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 FRMD6Q96NE9 622 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 ASH2LQ9UBL3 628 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 SVILO95425 2214 aa11.21□□□□□ -0.61
LIMK1-201ENST00000336180 TMEM269A0A1B0GVZ9 245 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 OR2M5A3KFT3 312 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 PATE4P0C8F1 98 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 RIDAP52758 137 aaKnown RBP11.21□□□□□ -0.62
LIMK1-201ENST00000336180 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 C3orf33Q6P1S2 294 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF679Q8IYX0 411 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 OR52I2Q8NH67 350 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 FAM46BQ96A09 425 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 DCBLD2Q96PD2 775 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 CCNL2Q96S94 520 aaPredicted RBP11.21□□□□□ -0.62
LIMK1-201ENST00000336180 SLC26A1Q9H2B4 701 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 PTGES2Q9H7Z7 377 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 MCUBQ9NWR8 336 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 IL17BQ9UHF5 180 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 DOCK10Q96BY6 2186 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.62
LIMK1-201ENST00000336180 PINLYPA6NC86 204 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 TP53I11O14683 189 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF43P17038 809 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 AVPR2P30518 371 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 GNALP38405 381 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 FAPQ12884 760 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 TRAM1Q15629 374 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 WIPI1Q5MNZ9 446 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-201ENST00000336180 PHYHD1Q5SRE7 291 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 LUZP2Q86TE4 346 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 TPRA1Q86W33 373 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 MISPQ8IVT2 679 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 SLC43A2Q8N370 569 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 JAGN1Q8N5M9 183 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 OR10H5Q8NGA6 315 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 OR1J4Q8NGS1 313 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 NPRL2Q8WTW4 380 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 ROBO4Q8WZ75 1007 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 RCE1Q9Y256 329 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 QDPRP09417 244 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 H2BFMP0C1H6 154 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 CDK2P24941 298 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 HSF2Q03933 536 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 SRSF6Q13247 344 aaKnown RBP11.2□□□□□ -0.62
LIMK1-201ENST00000336180 ZNF124Q15973 351 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 PEAR1Q5VY43 1037 aaPredicted RBP11.2□□□□□ -0.62
LIMK1-201ENST00000336180 SLC22A10Q63ZE4 541 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 TRILQ7L0X0 811 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 BEST3Q8N1M1 668 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 NAXEQ8NCW5 288 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 OR52N5Q8NH56 324 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 GPR148Q8TDV2 347 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
LIMK1-201ENST00000336180 MRPL48Q96GC5 212 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms