RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FBXL3Q9UKT7 428 aa12.25□□□□□ -0.45
APOBEC3B-202ENST00000335760 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 IQCMA0A1B0GVH7 501 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 DPRXA6NFQ7 191 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 DEFB108AA8MXU0 73 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 RER1O15258 196 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 SIAH2O43255 324 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 SGCEO43556 437 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 DOK2O60496 412 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 TMCC2O75069 709 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 IGLV1-44P01699 117 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 SERPINA5P05154 406 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 CECR9P0C854 216 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF14P17017 642 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 CD40P25942 277 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 ISL1P61371 349 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 GGTLC2Q14390 218 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 C3orf36Q3SXR2 165 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 CCDC92Q53HC0 331 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 TEX30Q5JUR7 227 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 NCMAPQ5T1S8 102 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 TMEM154Q6P9G4 183 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 TMEM108Q6UXF1 575 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 USP51Q70EK9 711 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 SLC16A9Q7RTY1 509 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 MYPOPQ86VE0 399 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF584Q8IVC4 421 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 ALDH16A1Q8IZ83 802 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 GJC3Q8NFK1 279 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 CNIH3Q8TBE1 160 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 SMAP2Q8WU79 429 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 CNN2Q99439 309 aaKnown RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 ESRP2Q9H6T0 727 aaKnown RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 GDF2Q9UK05 429 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 PRR14LQ5THK1 2151 aa12.24□□□□□ -0.45
APOBEC3B-202ENST00000335760 USP9YO00507 2555 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 SNTNA6NMZ2 147 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 A6NNC1 897 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 WBP4O75554 376 aaKnown RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 PTHP01270 115 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 PTAFRP25105 342 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 APEX1P27695 318 aaKnown RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 NUDT6P53370 316 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 HCCSP53701 268 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 NR1H2P55055 460 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 HIST1H3AP68431 136 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 BSPH1Q075Z2 132 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 TMED1Q13445 227 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 EIF2B1Q14232 305 aaKnown RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 PCK2Q16822 640 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 HIST2H3PS2Q5TEC6 136 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 CFAP77Q6ZQR2 320 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 HIST2H3AQ71DI3 136 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 VASH1Q7L8A9 365 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 SHFQ7M4L6 423 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 DPY19L4Q7Z388 723 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 DCXRQ7Z4W1 244 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 OR51G2Q8NGK0 314 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF184Q99676 751 aaPredicted RBP12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 ADGRL4Q9HBW9 690 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 HAO2Q9NYQ3 351 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 PLEK2Q9NYT0 353 aa12.23□□□□□ -0.45
APOBEC3B-202ENST00000335760 APOL3O95236 402 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 CD3EP07766 207 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 STOMP27105 288 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 LOXP28300 417 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 APLNRP35414 380 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 HTR5AP47898 357 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 MTNR1AP48039 350 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 SPOCK1Q08629 439 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 CDK5R2Q13319 367 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 RAB35Q15286 201 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 SMN1Q16637 294 aaKnown RBP12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 ELFN2Q5R3F8 820 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 ZNF787Q6DD87 383 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 THAP5Q7Z6K1 395 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 OR1F12Q8NHA8 337 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 RNFT2Q96EX2 444 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 KCNS3Q9BQ31 491 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 YIPF3Q9GZM5 350 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 C1orf198Q9H425 327 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 RAB26Q9ULW5 256 aa12.22□□□□□ -0.45
APOBEC3B-202ENST00000335760 ABCD4O14678 606 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 SYNGR3O43761 229 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 GOSR1O95249 250 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 SBK2P0C263 348 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 COX5BP10606 129 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 DBTP11182 482 aaKnown RBP12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 CCL2P13500 99 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 MYF6P23409 242 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 CALCRP30988 508 aa12.21□□□□□ -0.45
APOBEC3B-202ENST00000335760 GDI2P50395 445 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms