RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 THRSPQ92748 146 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 DERL3Q96Q80 235 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SMIM3Q9BZL3 60 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 MYLKQ15746 1914 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 FANCMQ8IYD8 2048 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 A0A0A6YYH2 397 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 A6NJ64 397 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 FAM166BA8MTA8 275 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 CCSO14618 274 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 EIF4E2O60573 245 aaKnown RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF254O75437 659 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 CLUP10909 449 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 SRMP19623 302 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 NLRC3Q7RTR2 1065 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 APOBEC4Q8WW27 367 aaKnown RBP10.68□□□□□ -0.7
HDAC6-201ENST00000334136 LRRC46Q96FV0 321 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF681Q96N22 645 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 CES1P1Q9UKY3 287 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 KCNE3Q9Y6H6 103 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 V9GYH0 126 aa10.68□□□□□ -0.7
HDAC6-201ENST00000334136 A0A0B4J2A0 478 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF208O43345 1280 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 NR2C1P13056 603 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ADH6P28332 368 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 VAMP2P63027 116 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 EBPQ15125 230 aaKnown RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF620Q6ZNG0 422 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 GPR32P1Q8NGA4 272 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 OR51S1Q8NGJ8 323 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 PNPLA2Q96AD5 504 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 KLHL15Q96M94 604 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 AKIRIN1Q9H9L7 192 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 FANCFQ9NPI8 374 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 GPATCH2Q9NW75 528 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 SHPKQ9UHJ6 478 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 GPR55Q9Y2T6 319 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 PLA2G10O15496 165 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 MPIG6BO95866 241 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 LIMS3P0CW19 117 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 LIMS4P0CW20 117 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 TACR3P29371 465 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 RPS27P42677 84 aaKnown RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ZFP36L2P47974 494 aaKnown RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.72e-7■■■■□ 20.9
HDAC6-201ENST00000334136 DYRK1AQ13627 763 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 TMEM176BQ3YBM2 270 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 DCAF10Q5QP82 559 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ZFP82Q8N141 532 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 SVBPQ8N300 66 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 SLC38A9Q8NBW4 561 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 PTPMT1Q8WUK0 201 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 RNF32Q9H0A6 362 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 BCL2L10Q9HD36 194 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ACKR4Q9NPB9 350 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 SIRT3Q9NTG7 399 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 PLEKHB1Q9UF11 243 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 IL17BQ9UHF5 180 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 A0A1B0GWA3 101 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 CHP2O43745 196 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 GPRIN2O60269 458 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 HTR3BO95264 441 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 OR2T7P0C7T2 308 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ABOP16442 354 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 SEC61A1P61619 476 aaKnown RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 TMUB2Q71RG4 321 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 PXT1Q8NFP0 134 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 OR6M1Q8NGM8 313 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 OR10R2Q8NGX6 335 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 OR2T27Q8NH04 317 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 M1APQ8TC57 530 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 ALG12Q9BV10 488 aa10.67□□□□□ -0.7
HDAC6-201ENST00000334136 MRPS18BQ9Y676 258 aaKnown RBP10.67□□□□□ -0.7
HDAC6-201ENST00000334136 HRKO00198 91 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 NKX2-8O15522 239 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SELENOFO60613 162 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ERCC1P07992 297 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 THBS1P07996 1170 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TLE3Q04726 772 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 RBPJQ06330 500 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 DUSP8Q13202 625 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 CHRFAM7AQ494W8 412 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 OTPQ5XKR4 325 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 B3GNTL1Q67FW5 361 aaPredicted RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SLC18B1Q6NT16 456 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF529Q6P280 563 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF836Q6ZNA1 936 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ZNF283Q8N7M2 679 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 C2CD4CQ8TF44 421 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 C3orf49Q96BT1 292 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ZG16BQ96DA0 208 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 WDFY2Q96P53 400 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 ADAM18Q9Y3Q7 739 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TRAV17A0A0B4J275 112 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TTLL8A6PVC2 850 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 TSPAN15O95858 294 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 CYC1P08574 325 aa10.66□□□□□ -0.7
HDAC6-201ENST00000334136 SNRNP70P08621 437 aaKnown RBP10.66□□□□□ -0.7
HDAC6-201ENST00000334136 PET100P0DJ07 73 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms