RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 FOXJ2Q9P0K8 574 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 ATG4BQ9Y4P1 393 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 OR51B4Q9Y5P0 310 aa10.73□□□□□ -0.69
SHMT2-201ENST00000328923 YLPM1P49750 1951 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 SLC38A8A6NNN8 435 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 EEF1E1-BLOC1S5C9J1V9 151 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 H7C417 338 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 M0R3H8 397 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 GEMIN2O14893 280 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 SLCO2B1O94956 709 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ERCC1P07992 297 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ATP1B2P14415 290 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 EPCAMP16422 314 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 IFNGR2P38484 337 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NPY4RP50391 375 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PTTG1IPP53801 180 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ERVFRD-1P60508 538 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NXPE4Q6UWF7 544 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 Q6ZRG5 221 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 GID4Q8IVV7 300 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 OR4S1Q8NGB4 309 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 OR6T1Q8NGN1 323 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 RNASEH2CQ8TDP1 164 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 SHDQ96IW2 340 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PRRC1Q96M27 445 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 SYT3Q9BQG1 590 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 CXorf36Q9H7Y0 433 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 MED20Q9H944 212 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 MRPS23Q9Y3D9 190 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PUS1Q9Y606 427 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 A0A0C4DFX4 3053 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 A0A1W2PN81 502 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 DHRS7CA6NNS2 312 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 KLKB1P03952 638 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ITGB2P05107 769 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NTSP30990 170 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 CHRNA7P36544 502 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NOVA1P51513 510 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 RPS26P62854 115 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 MC1RQ01726 317 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PAX5Q02548 391 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 CHRFAM7AQ494W8 412 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PRAMEF8Q5VWM4 474 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PRAMEF7Q5VXH5 474 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ABLIM2Q6H8Q1 611 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NIPAL3Q6P499 406 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 TPRG1Q6ZUI0 275 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 GALNTL5Q7Z4T8 443 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 CPOQ8IVL8 374 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 GALNT16Q8N428 558 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ZNF433Q8N7K0 673 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 OR1L6Q8NGR2 347 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 EDAQ92838 391 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NDC1Q9BTX1 674 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 VN1R3Q9BXE9 311 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 TTTY10Q9BZA0 68 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NEUROD4Q9HD90 331 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 HINT3Q9NQE9 182 aaKnown RBP10.72□□□□□ -0.69
SHMT2-201ENST00000328923 DMRT3Q9NQL9 472 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 NCDNQ9UBB6 729 aa10.72□□□□□ -0.69
SHMT2-201ENST00000328923 DOCK6Q96HP0 2047 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 USP34Q70CQ2 3546 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 SYNDIG1LA6NDD5 238 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 NPIPB15A6NHN6 443 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-201ENST00000328923 A6NJY4 79 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 NPC1O15118 1278 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 CCL25O15444 150 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 TBX19O60806 448 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 STC2O76061 302 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 DFFBO76075 338 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 AIFM1O95831 613 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 CD3DP04234 171 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 OR13C7P0DN81 318 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 NT5EP21589 574 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 GABRR1P24046 479 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 OR1D2P34982 312 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 OR12D2P58182 307 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 TAS2R50P59544 299 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 TANGO2Q6ICL3 276 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 PWWP2BQ6NUJ5 590 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 C16orf59Q7L2K0 433 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 ADCK2Q7Z695 626 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 FAM185AQ8N0U4 392 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 OR52N4Q8NGI2 321 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 OR5P2Q8WZ92 322 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 LMF1Q96S06 567 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 EFCAB11Q9BUY7 163 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 SEMA4GQ9NTN9 838 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 TAAR2Q9P1P5 351 aa10.71□□□□□ -0.69
SHMT2-201ENST00000328923 NKX6-3A6NJ46 265 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms