RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 CX3CR1P49238 355 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 EGR3Q06889 387 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 MGAT2Q10469 447 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 Q3ZCU0 254 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 GLYATL3Q5SZD4 288 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 AWAT2Q6E213 333 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.51□□□□□ -0.57
CCDC60-201ENST00000327554 LRRC69Q6ZNQ3 347 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 RCBTB1Q8NDN9 531 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 ZCCHC10Q8TBK6 192 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 SMARCD2Q92925 531 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 SGK3Q96BR1 496 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 CDC6Q99741 560 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 LMAN2LQ9H0V9 348 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 CGGBP1Q9UFW8 167 aaPredicted RBP11.51□□□□□ -0.57
CCDC60-201ENST00000327554 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 DAPP1Q9UN19 280 aa11.51□□□□□ -0.57
CCDC60-201ENST00000327554 A0A0A6YYC8 382 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-201ENST00000327554 I3L1I5 382 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-201ENST00000327554 LRP3O75074 770 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 IGKV1D-16P01601 117 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 CISD3P0C7P0 127 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 ADH6P28332 368 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 CMPK1P30085 196 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 GLP1RP43220 463 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PGDP52209 483 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 DVL1P1P54792 670 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PRPS1P60891 318 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 EIF2B1Q14232 305 aaKnown RBP11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SGCAQ16586 387 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 DEFB134Q4QY38 66 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 TMEM225Q6GV28 225 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 ADGRE4PQ86SQ3 457 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 LRRC75AQ8NAA5 344 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 RNF128Q8TEB7 428 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SECTM1Q8WVN6 248 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 THRSPQ92748 146 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 KCNK6Q9Y257 313 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 KPTNQ9Y664 436 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 C7orf77A4D0Y5 90 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 H7C1C5 153 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 FGF17O60258 216 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 NKX2-2O95096 273 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 INHAP05111 366 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 RHOP08100 348 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 HOXC4P09017 264 aaPredicted RBP11.5□□□□□ -0.57
CCDC60-201ENST00000327554 CD37P11049 281 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 ID4P47928 161 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 CENPAP49450 140 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 LCN6P62502 163 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 MESP2Q0VG99 397 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PRICKLE4Q2TBC4 344 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SLC22A6Q4U2R8 563 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 KRBOX4Q5JUW0 171 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PHF19Q5T6S3 580 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 FDX2Q6P4F2 183 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 ANGPTL5Q86XS5 388 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 AQP3Q92482 292 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PPP1R14AQ96A00 147 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 MALSU1Q96EH3 234 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 IP6K3Q96PC2 410 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SERINC2Q96SA4 455 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SLC5A7Q9GZV3 580 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 CAPN10Q9HC96 672 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 MAFFQ9ULX9 164 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 SLC22A13Q9Y226 551 aa11.5□□□□□ -0.57
CCDC60-201ENST00000327554 IGKV1D-42A0A075B6H8 117 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 A0A0A6YYH2 397 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 A6NJ64 397 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 GPANK1O95872 356 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SERPINA5P05154 406 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SMIM10L1P0DMW3 83 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 TLX1P31314 330 aaPredicted RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 NCMAPQ5T1S8 102 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 FIP1L1Q6UN15 594 aaKnown RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 FJX1Q86VR8 437 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 GVQW1Q8N7I0 195 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 ZNF563Q8TA94 476 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 C3orf49Q96BT1 292 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SMIM10Q96HG1 83 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 MESP1Q9BRJ9 268 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 NUDT9Q9BW91 350 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 POMT1Q9Y6A1 747 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 KIF26BQ2KJY2 2108 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 HSPB2A8KAH6 182 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 GRXCR1A8MXD5 290 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SLC34A2O95436 690 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 CD2P06729 351 aa11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SNRNP70P08621 437 aaKnown RBP11.49□□□□□ -0.57
CCDC60-201ENST00000327554 SULT1A2P50226 295 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms