RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 OR7A5Q15622 319 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 PHYHD1Q5SRE7 291 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 NSUN5P2Q63ZY6 315 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 C8orf82Q6P1X6 216 aaPredicted RBP6.48□□□□□ -1.37
SMC1A-201ENST00000322213 BTNL8Q6UX41 500 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 ESPNLQ6ZVH7 1005 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 LGI3Q8N145 548 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM217Q8N7C4 229 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 OR10A5Q9H207 317 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 OR10A2Q9H208 303 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 UCK1Q9HA47 277 aa6.48□□□□□ -1.37
SMC1A-201ENST00000322213 CD300LBA8K4G0 201 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 H7BYZ3 331 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PRR35P0CG20 571 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FUT1P19526 365 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 HIST1H1TP22492 207 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FCGR2CP31995 323 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 AKR1C3P42330 323 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SELENOPP49908 381 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ENDOGQ14249 297 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 RAB35Q15286 201 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 INPP5JQ15735 1006 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FAM110CQ1W6H9 321 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PYCR3Q53H96 274 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR5M9Q8NGP3 310 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 MS4A3Q96HJ5 214 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TMPRSS13Q9BYE2 586 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 KCNIP2Q9NS61 270 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 MANSC4A6NHS7 340 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 B4DEV8 164 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 NDUFA2O43678 99 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 AIFM1O95831 613 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OPN1MWP04001 364 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OPN1MW2P0DN77 364 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OPN1MW3P0DN78 364 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF93P35789 620 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SCAND1P57086 179 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 LCN6P62502 163 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM128Q5BJH2 165 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZNF836Q6ZNA1 936 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 CTU1Q7Z7A3 348 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SLC41A2Q96JW4 573 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 C11orf84Q9BUA3 381 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PARP12Q9H0J9 701 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 IL17CQ9P0M4 197 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GJB3O75712 270 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 WNT1P04628 370 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 HNRNPA2B1P22626 353 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PTTG1IPP53801 180 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SIM1P81133 766 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SYPL1Q16563 259 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TOMM20LQ6UXN7 152 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM182Q6ZP80 229 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ABI3BPQ7Z7G0 1075 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ACOT4Q8N9L9 421 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FBXL12Q9NXK8 326 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GPR31O00270 319 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PLGP00747 810 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 HOXA11P31270 313 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PTGFRP43088 359 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 DHRS2Q13268 280 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 AGBL4Q5VU57 503 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FJX1Q86VR8 437 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ZDHHC22Q8N966 263 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 C22orf15Q8WYQ4 148 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TSSK2Q96PF2 358 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 CREBZFQ9NS37 354 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 NPIPB15A6NHN6 443 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 FAM166BA8MTA8 275 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 CHRM4P08173 479 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ANKRD34AQ69YU3 496 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TMEM225Q6GV28 225 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR5K2Q8NHB8 316 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PFN4Q8NHR9 129 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 EGLN2Q96KS0 407 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 CCSO14618 274 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 B4GALT2O60909 372 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GLCEO94923 617 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SULT1A1P50225 295 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 EMC4Q5J8M3 183 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SAPCD1Q5SSQ6 148 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR51F2Q8NH61 342 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OPN4Q9UHM6 478 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 A0A1W2PPV4 95 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 OR6C76A6NM76 312 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 CTDSPLO15194 276 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PLPP2O43688 288 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 APOA2P02652 100 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 GALR1P47211 349 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 PCBP4P57723 403 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 BRICD5Q6PL45 260 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 TIPARPQ7Z3E1 657 aaKnown RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 SNX22Q96L94 193 aa6.47□□□□□ -1.37
SMC1A-201ENST00000322213 ALX4Q9H161 411 aaPredicted RBP6.47□□□□□ -1.37
SMC1A-201ENST00000322213 KLK11Q9UBX7 282 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms