RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MRPL2Q5T653 305 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 CTRB2Q6GPI1 263 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ZNF620Q6ZNG0 422 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TMEM123Q8N131 208 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 LMNTD1Q8N9Z9 388 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR52N1Q8NH53 320 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 KCNG3Q8TAE7 436 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TNFRSF13CQ96RJ3 184 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SEMA6CQ9H3T2 930 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 LOC102725191A0A1B0GVB3 256 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 TUBAL3A6NHL2 446 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SLC31A2O15432 143 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ZFAND5O76080 213 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 LGI1O95970 557 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ZNF140P52738 457 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 ISL1P61371 349 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ZNF90Q03938 601 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 CATR1Q13166 79 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SELENBP1Q13228 472 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 RBMXL3Q8N7X1 1067 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 BPIFCQ8NFQ6 507 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR5D18Q8NGL1 313 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SLC38A5Q8WUX1 472 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 NARFLQ9H6Q4 476 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 ATAD5Q96QE3 1844 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 SULT2B1O00204 365 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OPN1LWP04000 364 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 HNF1AP20823 631 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 RFX2P48378 723 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR10A3P58181 314 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 UBE2MP61081 183 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 RANP62826 216 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 CHRNEQ04844 493 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 LTC4SQ16873 150 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 GLYATL3Q5SZD4 288 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 RPUSD3Q6P087 351 aaKnown RBP7.5□□□□□ -1.21
VPS41-202ENST00000310301 TMEM92Q6UXU6 159 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 OR4A16Q8NH70 328 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 HSD17B8Q92506 261 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 MOKQ9UQ07 419 aa7.5□□□□□ -1.21
VPS41-202ENST00000310301 LILRA5A6NI73 299 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 RFPL4AA6NLU0 287 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 RFPL4AL1F8VTS6 287 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 HSD17B6O14756 317 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 GPX5O75715 221 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 CISD3P0C7P0 127 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 AKR1C3P42330 323 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 GZMKP49863 264 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 BIDP55957 195 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 GPR85P60893 370 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 GPNMBQ14956 572 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 EXT1Q16394 746 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 ADGRE4PQ86SQ3 457 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PLPP7Q8NBV4 271 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 FAM234AQ9H0X4 552 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PARD6AQ9NPB6 346 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 AKIP1Q9NQ31 210 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 TRAPPC2LQ9UL33 140 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 FLVCR2Q9UPI3 526 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 EVPLQ92817 2033 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 OR5H14A6NHG9 310 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 KLRC4-KLRK1H3BQV0 150 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 JTBO76095 146 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 SNRPGP62308 76 aaKnown RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 PMPCAQ10713 525 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 LRRC18Q8N456 261 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 SLC22A24Q8N4F4 322 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 COMMD1Q8N668 190 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 FGF11Q92914 225 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PIGQQ9BRB3 760 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 NUDT22Q9BRQ3 303 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 CABLES2Q9BTV7 478 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 AMBRA1Q9C0C7 1298 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 HIPK2Q9H2X6 1198 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 CDCP1Q9H5V8 836 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 WDR76Q9H967 626 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 STARD5Q9NSY2 213 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 MYOTQ9UBF9 498 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 RAB22AQ9UL26 194 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 A0A087WUU8 490 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 A8MVM7 634 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 P2RY10O00398 339 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 CSF3P09919 207 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 FABP4P15090 132 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 ECI1P42126 302 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 RPL34P49207 117 aaKnown RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 KRTDAPP60985 99 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 TRA2BP62995 288 aaKnown RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 SLC35A2P78381 396 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 MEP1BQ16820 701 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 SPRED2Q7Z698 418 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 PELI3Q8N2H9 469 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 ZFP62Q8NB50 900 aaPredicted RBP7.49□□□□□ -1.21
VPS41-202ENST00000310301 OR13C8Q8NGS7 320 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 OR13D1Q8NGV5 346 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 NMNAT3Q96T66 252 aa7.49□□□□□ -1.21
VPS41-202ENST00000310301 OR51I2Q9H344 312 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms