RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SF3B5Q9BWJ5 86 aaKnown RBP5.44□□□□□ -1.54
SEC22A-201ENST00000309934 CDCP1Q9H5V8 836 aa5.44□□□□□ -1.54
SEC22A-201ENST00000309934 NUDT15Q9NV35 164 aa5.44□□□□□ -1.54
SEC22A-201ENST00000309934 ABRACLQ9P1F3 81 aa5.44□□□□□ -1.54
SEC22A-201ENST00000309934 FBXL2Q9UKC9 423 aa5.44□□□□□ -1.54
SEC22A-201ENST00000309934 CMAHPQ9Y471 501 aa5.44□□□□□ -1.54
SEC22A-201ENST00000309934 LOC102723996A0A087X1L8 192 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 A0A0A6YYJ9 748 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 BHLHE40O14503 412 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TSPAN2O60636 221 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CSF2RBP32927 897 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MTNR1BP49286 362 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 UCNP55089 124 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GRB2P62993 217 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 YBX1P67809 324 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ARF1P84077 181 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TGFBR3Q03167 851 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RBPJQ06330 500 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 IL18Q14116 193 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF74Q16587 644 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NTRK2Q16620 822 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PCGF3Q3KNV8 242 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZMAT1Q5H9K5 638 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TEX30Q5JUR7 227 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TBPL2Q6SJ96 375 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RPTNQ6XPR3 784 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MARCH3Q86UD3 253 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 LYSMD2Q8IV50 215 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR13C2Q8NGS9 318 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR6F1Q8NGZ6 308 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GTF3AQ92664 365 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 AP1S3Q96PC3 154 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GPX7Q96SL4 187 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 COMMD9Q9P000 198 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 POMT1Q9Y6A1 747 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NPIPA5A0A0B4J1W7 369 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 M0R143 59 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MAGEB4O15481 346 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SPDEFO95238 335 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 IGKV3-11P04433 115 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CT45A8P0DMV1 189 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CT45A9P0DMV2 189 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 IFNGR1P15260 489 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GDF1P27539 372 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RPS19P39019 145 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GZMKP49863 264 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CT45A2Q5DJT8 189 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF813Q6ZN06 617 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ADGRG3Q86Y34 549 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR5M3Q8NGP4 307 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR4K13Q8NH42 304 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 GPR148Q8TDV2 347 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NUDT11Q96G61 164 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR5B2Q96R09 309 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ACOXLQ9NUZ1 547 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TCFL5Q9UL49 500 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 HIF3AQ9Y2N7 669 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MRPS18CQ9Y3D5 142 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PRRC2BQ5JSZ5 2229 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PLXNB3Q9ULL4 1909 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 DOCK8Q8NF50 2099 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 FXYD6-FXYD2A0A087WZ82 144 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CDC14CA4D256 554 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RFPL4AA6NLU0 287 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 C4orf47A7E2U8 309 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 RFPL4AL1F8VTS6 287 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 LGALS8O00214 317 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 FRS3O43559 492 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PET100P0DJ07 73 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 HOXB3P14651 431 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NQO2P16083 231 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CNR1P21554 472 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 CTSSP25774 331 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PITPNBP48739 271 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 FHITP49789 147 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SCAND1P57086 179 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PPP1CAP62136 330 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NHLH2Q02577 135 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SKP2Q13309 424 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR8G1Q15617 311 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR7A5Q15622 319 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SLC35F1Q5T1Q4 408 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NIPAL3Q6P499 406 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 IL20RBQ6UXL0 311 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 MEX3BQ6ZN04 569 aaKnown RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ATG4DQ86TL0 474 aaPredicted RBP5.43□□□□□ -1.54
SEC22A-201ENST00000309934 NKAIN4Q8IVV8 208 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 PRR22Q8IZ63 422 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 Q8NFD4 153 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 OR1J2Q8NGS2 313 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 THEM6Q8WUY1 208 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SCGB3A2Q96PL1 93 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 HIST1H2AAQ96QV6 131 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 TNFRSF13CQ96RJ3 184 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 LMF1Q96S06 567 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 KATNB1Q9BVA0 655 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ARL6Q9H0F7 186 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 FXYD6Q9H0Q3 95 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 ZNF391Q9UJN7 358 aa5.43□□□□□ -1.54
SEC22A-201ENST00000309934 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms