RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SIRT3Q9NTG7 399 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZNF586Q9NXT0 402 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CPSF4LA6NMK7 179 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ACP5P13686 325 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 EPHA1P21709 976 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 GNRHRP30968 328 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CCKARP32238 428 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TNFSF8P32971 234 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SKP2Q13309 424 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLCO4C1Q6ZQN7 724 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PPP1R14DQ9NXH3 145 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 C13orf42A0A1B0GVH6 325 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FAM24AA6NFZ4 105 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ISG15P05161 165 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 HMGN2P05204 90 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZBTB25P24278 435 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ADIPOR2Q86V24 386 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 COMMD7Q86VX2 200 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ABHD1Q96SE0 405 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 HSD17B6O14756 317 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLC31A1O15431 190 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 DHRS3O75911 302 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TIMP2P16035 220 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 EMP2P54851 167 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 DSCR4P56555 118 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM183BQ1AE95 376 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 RPL7L1Q6DKI1 246 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 MZB1Q8WU39 189 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 MR1Q95460 341 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 YIPF5Q969M3 257 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CLEC5AQ9NY25 188 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 DNAJC27Q9NZQ0 273 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 USP22Q9UPT9 525 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ANKRD34CP0C6C1 535 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLC6A12P48065 614 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 C1orf220Q5T0J3 134 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ABHD17CQ6PCB6 329 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FAM217AQ8IXS0 508 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 KLHDC9Q8NEP7 349 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LKAAEAR1Q8TD35 194 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LIN37Q96GY3 246 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 PECRQ9BY49 303 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SHARPINQ9H0F6 387 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CD300LBA8K4G0 201 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 C21orf140B9A014 251 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 MRPL33O75394 65 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 NRASP01111 189 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SEMG1P04279 462 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SFTPBP07988 381 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 NCK1P16333 377 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR4D1Q15615 310 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SPRED3Q2MJR0 410 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FAM180AQ6UWF9 173 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ANGPTL5Q86XS5 388 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR1S1Q8NH92 325 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CMBLQ96DG6 245 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 METTL17Q9H7H0 456 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 CENPMQ9NSP4 180 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 EXO1Q9UQ84 846 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 TCRBV21S2A2A0A5A6 115 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CDKN2DP55273 166 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FAM71CQ8NEG0 241 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PXT1Q8NFP0 134 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CPPED1Q9BRF8 314 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 GJD2Q9UKL4 321 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FLVCR2Q9UPI3 526 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 KLF13Q9Y2Y9 288 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZBTB42B2RXF5 422 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 GATCO43716 136 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 FPR2P25090 351 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ARRB2P32121 409 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 BCL6P41182 706 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR1D4P47884 311 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PLBD1Q6P4A8 553 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM229BQ8NBD8 167 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 RBPMSQ93062 196 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 CHST8Q9H2A9 424 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMED7Q9Y3B3 224 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 R4GMQ9 66 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 DSPPQ9NZW4 1301 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM150BA6NC51 233 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SH2D1BO14796 132 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CST4P01036 141 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZNF865P0CJ78 1059 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM184AQ6ZMB5 413 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 S1PR3Q99500 378 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PKMYT1Q99640 499 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TIMM10BQ9Y5J6 103 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TRAV9-1A0A075B6T8 112 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 PRSS37A4D1T9 235 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TISP43B9A030 160 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TXNL1O43396 289 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 LAMP1P11279 417 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 TBXA2RP21731 343 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CYB561P49447 251 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MEOX2P50222 304 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 MFSD12Q6NUT3 480 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 FBXW12Q6X9E4 464 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 CMTM2Q8TAZ6 248 aa3.67□□□□□ -1.82
USH2A-201ENST00000307340 ZNRF4Q8WWF5 429 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms