RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DANCRP0C864 163 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CLUP10909 449 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF35P13682 527 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 NR4A1P22736 598 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RAD52P43351 418 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ALDH3A2P51648 485 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SNRPD2P62316 118 aaKnown RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RAB35Q15286 201 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 KLHL12Q53G59 568 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZNF362Q5T0B9 420 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LCN1P1Q5VSP4 162 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OTPQ5XKR4 325 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PLBD1Q6P4A8 553 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CORO6Q6QEF8 472 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CXXC5Q7LFL8 322 aaKnown RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EME1Q96AY2 570 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TRAF4Q9BUZ4 470 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GABARAPL3Q9BY60 117 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 NMNAT2Q9BZQ4 307 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 BCL2L14Q9BZR8 327 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HDHD2Q9H0R4 259 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR51B6Q9H340 312 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MED20Q9H944 212 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ELOVL3Q9HB03 270 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 USE1Q9NZ43 259 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ATPIF1Q9UII2 106 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TMEFF2Q9UIK5 374 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FBXO9Q9UK97 447 aaPredicted RBP9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 COMMD3-BMI1R4GMX3 469 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PMF1-BGLAPU3KQ54 211 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ARFGEF3Q5TH69 2177 aa9.51□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CHD3Q12873 2000 aaKnown RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR6C6A6NF89 314 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 B9A039 149 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RER1O15258 196 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PRODHO43272 600 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GLCEO94923 617 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ABHD16AO95870 558 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TFP02787 698 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ALPLP05186 524 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SPARCP09486 303 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR4A8P0C604 315 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FAM157BP0CG42 384 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PCSK6P29122 969 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 THBS4P35443 961 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GLRXP35754 106 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SERPINF1P36955 418 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ENTPD1P49961 510 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SELENOVP59797 346 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HGFACQ04756 655 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DBPQ10586 325 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 RCN1Q15293 331 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SLC35D3Q5M8T2 416 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ELFN2Q5R3F8 820 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SLX4IPQ5VYV7 408 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SLC18B1Q6NT16 456 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ZBTB49Q6ZSB9 765 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 VASH1Q7L8A9 365 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ERI1Q8IV48 349 aaKnown RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CPOQ8IVL8 374 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CBR4Q8N4T8 237 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CPEB3Q8NE35 698 aaKnown RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 OR6N2Q8NGY6 317 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PERPQ96FX8 193 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 INTS14Q96SY0 518 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 DDOQ99489 341 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PITX2Q99697 317 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 FOXC2Q99958 501 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GRIP2Q9C0E4 1043 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PLK3Q9H4B4 646 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 HINT3Q9NQE9 182 aaKnown RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 MRPL22Q9NWU5 206 aaKnown RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 H2AFY2Q9P0M6 372 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GDF2Q9UK05 429 aaPredicted RBP9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LHFPL6Q9Y693 200 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 H0YHG0 523 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SYNGR3O43761 229 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GPRIN2O60269 458 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ERCC1P07992 297 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ANPEPP15144 967 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GSTT1P30711 240 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CDKN1AP38936 164 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 PTH2RP49190 550 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 UCP2P55851 309 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ATP5J2P56134 94 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CDC42P60953 191 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 NKX6-1P78426 367 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 EFNB3Q15768 340 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 ADIPOQQ15848 244 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 CCDC92Q53HC0 331 aaPredicted RBP9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 C12orf73Q69YU5 71 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 TMEM154Q6P9G4 183 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 SHFQ7M4L6 423 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 GID4Q8IVV7 300 aa9.49□□□□□ -0.89
CSPG4P1Y-201ENST00000306641 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms