RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 BCO1Q9HAY6 547 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 RRASP10301 218 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 SLC35A1P78382 337 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 PAX5Q02548 391 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 CHAC2Q8WUX2 184 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 NEIL2Q969S2 332 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GDF2Q9UK05 429 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GPR55Q9Y2T6 319 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 DIP2CQ9Y2E4 1556 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 IGHV3-64DA0A0J9YX35 117 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 NPIPB15A6NHN6 443 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 CD200P41217 278 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 THOC3Q96J01 351 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 PECRQ9BY49 303 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 SHC1P29353 583 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 COL5A1-AS1Q5SY13 56 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 C19orf47Q8N9M1 422 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ACVR1CQ8NER5 493 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 OR5AP2Q8NGF4 316 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF385BQ569K4 471 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF716A6NP11 495 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 Q499Y3 187 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ABHD4Q8TB40 342 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GNPNAT1Q96EK6 184 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 TRMT61AQ96FX7 289 aaKnown RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 ADGRG7Q96K78 797 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GPX7Q96SL4 187 aaPredicted RBP12.34□□□□□ -0.43
TRIM56-201ENST00000306085 GPR173Q9NS66 373 aa12.34□□□□□ -0.43
TRIM56-201ENST00000306085 DIP2BQ9P265 1576 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 OR52A4PA6NMU1 304 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 SOX15O60248 233 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 TBX19O60806 448 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.43
TRIM56-201ENST00000306085 PLK5Q496M5 336 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 LRP11Q86VZ4 500 aa12.33□□□□□ -0.43
TRIM56-201ENST00000306085 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.33□□□□□ -0.43
TRIM56-201ENST00000306085 COMMD5Q9GZQ3 224 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 FZD8Q9H461 694 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 BMI1P35226 326 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF264O43296 627 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 CCL5P13501 91 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SLC10A2Q12908 348 aaPredicted RBP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SSR4P51571 173 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 PTPRUQ92729 1446 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 PCNX2A6NKB5 2137 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 K7ERU9 68 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 CLDN2P57739 230 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 PRSS45Q7RTY3 260 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 OR2AK2Q8NG84 335 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 RHOXF1Q8NHV9 184 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SLC5A10A0PJK1 596 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 ST8SIA3O43173 380 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 B3GNTL1Q67FW5 361 aaPredicted RBP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 APCDD1Q8J025 514 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 FAM131CQ96AQ9 280 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 NPY6RQ99463 290 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 A0A0A6YYJ9 748 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SCG5P05408 212 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SRSF9Q13242 221 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRIM56-201ENST00000306085 SLC22A12Q96S37 553 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 AKAP12Q02952 1782 aa12.33□□□□□ -0.44
TRIM56-201ENST00000306085 CPMP14384 443 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 GPR85P60893 370 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 OR10P1Q8NGE3 313 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 OR1L4Q8NGR5 311 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 PRSS3P2Q8NHM4 247 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 IGSF5Q9NSI5 407 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM56-201ENST00000306085 POM121BA6NF01 834 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 M0R2Z0 102 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 GASTP01350 101 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 ZNF547Q8IVP9 402 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 OR10D4PQ8NGN7 298 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 AQP9O43315 295 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 DUS4LO95620 317 aaKnown RBP12.32□□□□□ -0.44
TRIM56-201ENST00000306085 EDN1P05305 212 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 OR2T7P0C7T2 308 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 NTSR1P30989 418 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 CGGBP1Q9UFW8 167 aaPredicted RBP12.32□□□□□ -0.44
TRIM56-201ENST00000306085 ANKRD61A6NGH8 418 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 PTBP1P26599 531 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM56-201ENST00000306085 EIF4E3Q8N5X7 224 aaKnown RBP12.32□□□□□ -0.44
TRIM56-201ENST00000306085 ELOVL1Q9BW60 279 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
TRIM56-201ENST00000306085 TAAR5O14804 337 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms