RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 TMEM201Q5SNT2 666 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 FAM27D1Q5T7N8 215 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 GJC3Q8NFK1 279 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 CPT1CQ8TCG5 803 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PIGTQ969N2 578 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 JAM3Q9BX67 310 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 NKX2-4Q9H2Z4 354 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 IL20Q9NYY1 176 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PHIPQ8WWQ0 1821 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ZFP92A6NM28 416 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ADRA2CP18825 462 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 RAB11AP62491 216 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM229BQ8NBD8 167 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ARHGDIGQ99819 225 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ITGB4P16144 1822 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 SERTM1A2A2V5 107 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 HOXD11P31277 338 aaPredicted RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 AK3Q9UIJ7 227 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 PIGLQ9Y2B2 252 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 PTRH2Q9Y3E5 179 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 EIF1BO60739 113 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 EIF1P41567 113 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 HNF4GQ14541 408 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ARSJQ5FYB0 599 aaPredicted RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 SUMF1Q8NBK3 374 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 OR8D4Q8NGM9 314 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 DLL4Q9NR61 685 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ACAD8Q9UKU7 415 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 TAF1P21675 1872 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 PYCARD-AS1I3L0S3 204 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 NDUFB6O95139 128 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 GDF1P27539 372 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ST3GAL2Q16842 350 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ELFN2Q5R3F8 820 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF425Q6IV72 752 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 CPEB2Q7Z5Q1 589 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 C2orf50Q96LR7 162 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 WWTR1Q9GZV5 400 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 PPP5D1E7EU14 171 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 IGHA2P01877 340 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 MRPS21P82921 87 aaKnown RBP11.72□□□□□ -0.53
COL3A1-201ENST00000304636 TESK1Q15569 626 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 ADAM19Q9H013 955 aa11.72□□□□□ -0.53
COL3A1-201ENST00000304636 PDE4DIPQ5VU43 2346 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 E5RGE8 158 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 FGF17O60258 216 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 GPNMBQ14956 572 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF628Q5EBL2 1059 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 OR52W1Q6IF63 320 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 C11orf87Q6NUJ2 197 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 RPUSD3Q6P087 351 aaKnown RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 IL34Q6ZMJ4 242 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 EXD3Q8N9H8 876 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 ABHD5Q8WTS1 349 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 WBP2Q969T9 261 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 H7C1Q1 480 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF354AO60765 605 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 EEF1A2Q05639 463 aaKnown RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 AGERQ15109 404 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 AAED1Q7RTV5 226 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF808Q8N4W9 903 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 SPICQ8N5J4 248 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 IL22RA1Q8N6P7 574 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 KIRREL1Q96J84 757 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF2Q9BSG1 426 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 BCO1Q9HAY6 547 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 MED16Q9Y2X0 877 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 HCFC2Q9Y5Z7 792 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 CBX7O95931 251 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 CD38P28907 300 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 OR2B8PP59922 312 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 DAZAP1Q96EP5 407 aaKnown RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 LINC00615Q96LM1 132 aaPredicted RBP11.71□□□□□ -0.53
COL3A1-201ENST00000304636 CA14Q9ULX7 337 aa11.71□□□□□ -0.53
COL3A1-201ENST00000304636 H3BQ06 376 aaPredicted RBP11.71□□□□□ -0.54
COL3A1-201ENST00000304636 PLPP2O43688 288 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 HRH1P35367 487 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms