RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ANXA2P2A6NMY6 339 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CCR9P51686 369 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CLDN15P56746 228 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 POU4F3Q15319 338 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 SLC25A35Q3KQZ1 300 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 SLC25A47Q6Q0C1 308 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 Q6ZNX1 250 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CHMP1BQ7LBR1 199 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 PRSS35Q8N3Z0 413 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ZBTB8BQ8NAP8 495 aaPredicted RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 CPNE4Q96A23 557 aaPredicted RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 EXTL2Q9UBQ6 330 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 DHDHQ9UQ10 334 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ACOT7O00154 380 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 GPR171O14626 319 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 UNQ9370/PRO34162Q6UXP9 181 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 NR2C2APQ86WQ0 139 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 TMEM178AQ8NBL3 297 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 HTRA1Q92743 480 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 LDAHQ9H6V9 325 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 R4GMQ9 66 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 V9GYH0 126 aa12.89□□□□□ -0.35
SHCBP1-201ENST00000303383 PSMD7P51665 324 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 PPIAP62937 165 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 MFAP5Q13361 173 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 DEGS2Q6QHC5 323 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 NHLRC1Q6VVB1 395 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 TMPRSS7Q7RTY8 843 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 RPS4Y2Q8TD47 263 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 RGP1Q92546 391 aaPredicted RBP12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 ASH2LQ9UBL3 628 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 CKLFQ9UBR5 152 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 GDF2Q9UK05 429 aaPredicted RBP12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 FBXL3Q9UKT7 428 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 PHF3Q92576 2039 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A087WV48 116 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 SYNGR4O95473 234 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 PAHP00439 452 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 KIR3DL2P43630 455 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 SELENOPP49908 381 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 SUCLG1P53597 346 aaKnown RBP12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 BCL2L15Q5TBC7 163 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 AAED1Q7RTV5 226 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 GGNQ86UU5 652 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 ST7LQ8TDW4 575 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 SLC6A15Q9H2J7 730 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 CYB5R1Q9UHQ9 305 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 OR52A1Q9UKL2 312 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
SHCBP1-201ENST00000303383 GVINP1Q7Z2Y8 2422 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 SLC43A1O75387 559 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 MAS1P04201 325 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 EPXP11678 715 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 SCN1BQ07699 218 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 SRSF6Q13247 344 aaKnown RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF766Q5HY98 468 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 INTS12Q96CB8 462 aaKnown RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 V9GY05 133 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ANKRD61A6NGH8 418 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 NME2P1O60361 137 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 KRT33AO76009 404 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 WNT11O96014 354 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 PNPP00491 289 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 RAF1P04049 648 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 NME2P22392 152 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ARPC4P59998 168 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 HES5Q5TA89 166 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 FDX2Q6P4F2 183 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF704Q6ZNC4 412 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 FCRLAQ7L513 359 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 C19orf18Q8NEA5 215 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ABRACLQ9P1F3 81 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 CEP250Q9BV73 2442 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF878C9JN71 531 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 DHHO43323 396 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 CELA3AP09093 270 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 EVX1P49640 407 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 TAB1Q15750 504 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 PCK2Q16822 640 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 METAP1DQ6UB28 335 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 SRRQ9GZT4 340 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms