RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 ESPNLQ6ZVH7 1005 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 GGNQ86UU5 652 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 OR10H5Q8NGA6 315 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 LILRB4Q8NHJ6 448 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF703Q9H7S9 590 aaPredicted RBP12.68□□□□□ -0.38
C9orf3-202ENST00000297979 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 A0A1W2PPK0 400 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 TMEM212A6NML5 194 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF879B4DU55 563 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 TM4SF5O14894 197 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 TBX1O43435 398 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 LAP3P28838 519 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 RASGEF1BQ0VAM2 473 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF181Q2M3W8 571 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 FDX2Q6P4F2 183 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 TMPRSS7Q7RTY8 843 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 RNF128Q8TEB7 428 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 ABCB10Q9NRK6 738 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 CACNG2Q9Y698 323 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 V9GYH0 126 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 FREM2Q5SZK8 3169 aa12.68□□□□□ -0.38
C9orf3-202ENST00000297979 A0A1W2PPL8 197 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 OR4C45A6NMZ5 311 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
C9orf3-202ENST00000297979 WNT11O96014 354 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 NR2C1P13056 603 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-202ENST00000297979 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
C9orf3-202ENST00000297979 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
C9orf3-202ENST00000297979 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 HSD17B12Q53GQ0 312 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 IDNKQ5T6J7 187 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 AGAP7PQ5VUJ5 663 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 SFXN4Q6P4A7 337 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 SLC25A47Q6Q0C1 308 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 DCXRQ7Z4W1 244 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 OR9K2Q8NGE7 335 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 CHPT1Q8WUD6 406 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 C4orf45Q96LM5 186 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 AGAP4Q96P64 663 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 A0A087WV48 116 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 A0A1B0GTH9 108 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 A0A1B0GWJ7 208 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 B8ZZF3 427 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 CLN5O75503 358 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 RAB3BP20337 219 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 GFRA1P56159 465 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 OR10A3P58181 314 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 Q6ZNX1 250 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 ASB18Q6ZVZ8 466 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 UBQLNLQ8IYU4 475 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 ST7LQ8TDW4 575 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 MCHR2Q969V1 340 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 NOX4Q9NPH5 578 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 DAPK2Q9UIK4 370 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 LRP12Q9Y561 859 aa12.67□□□□□ -0.38
C9orf3-202ENST00000297979 A0A0G2JK05 382 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 OR5H15A6NDH6 313 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 TRABD2BA6NFA1 517 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 A6NL46 340 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 SMAD9O15198 467 aaKnown RBP12.66□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF432O94892 652 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 SOX8P57073 446 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 CARD18P57730 90 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 WDR38Q5JTN6 314 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF544Q6NX49 715 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 ZNF676Q8N7Q3 588 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 MDS2Q8NDY4 140 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 KCTD12Q96CX2 325 aaKnown RBP12.66□□□□□ -0.38
C9orf3-202ENST00000297979 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 ADGRG7Q96K78 797 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 DERL3Q96Q80 235 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 CCDC32Q9BV29 185 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 SF3B5Q9BWJ5 86 aaKnown RBP12.66□□□□□ -0.38
C9orf3-202ENST00000297979 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 KLF13Q9Y2Y9 288 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-202ENST00000297979 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 HPNP05981 417 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 QDPRP09417 244 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-202ENST00000297979 RFC3P40938 356 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 KIR3DL2P43630 455 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 STARP49675 285 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 CCR9P51686 369 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 Q499Y3 187 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
C9orf3-202ENST00000297979 LYSMD2Q8IV50 215 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms