RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 RAB11BQ15907 218 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 Q5BKY6 102 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 THEM4Q5T1C6 240 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 DCAF12Q5T6F0 453 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 NHLRC1Q6VVB1 395 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 TCTE3Q8IZS6 198 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 LILRB4Q8NHJ6 448 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
NXF1-201ENST00000294172 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
NXF1-201ENST00000294172 ZBTB8AQ96BR9 441 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 SLC25A44Q96H78 314 aaPredicted RBP12.48□□□□□ -0.41
NXF1-201ENST00000294172 EMC7Q9NPA0 242 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 HHLA2Q9UM44 414 aa12.48□□□□□ -0.41
NXF1-201ENST00000294172 LOC107986453A0A1B0GWG9 222 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 SRSF10O75494 262 aaKnown RBP12.47□□□□□ -0.41
NXF1-201ENST00000294172 STK17BO94768 372 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 HRGP04196 525 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 GP1BAP07359 652 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 LAP3P28838 519 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 DNASE1L1P49184 302 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 POU3F4P49335 361 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 MFAP5Q13361 173 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 RAET1LQ5VY80 246 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 NOXO1Q8NFA2 376 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 C7orf50Q9BRJ6 194 aaKnown RBP12.47□□□□□ -0.41
NXF1-201ENST00000294172 BEX1Q9HBH7 125 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 HPF1Q9NWY4 346 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 FBXO4Q9UKT5 387 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 POLR1DQ9Y2S0 133 aa12.47□□□□□ -0.41
NXF1-201ENST00000294172 PMS2P1A4D2B8 440 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 SMLR1H3BR10 107 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 P2RY10O00398 339 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
NXF1-201ENST00000294172 GMDSO60547 372 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 PGA4P0DJD7 388 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 PGA3P0DJD8 388 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ACP1P24666 158 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ADH6P28332 368 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 CLDN6P56747 220 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 C2orf76Q3KRA6 126 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 RNF133Q8WVZ7 376 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 FAM3DQ96BQ1 224 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 OXGR1Q96P68 337 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 MED28Q9H204 178 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 PLEKHA1Q9HB21 404 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 HRASLSQ9HDD0 168 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 COPZ2Q9P299 210 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 KLHL13Q9P2N7 655 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 CYB5R1Q9UHQ9 305 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 HDGFL3Q9Y3E1 203 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 LOXL2Q9Y4K0 774 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 DCDC2BA2VCK2 349 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 SULT1B1O43704 296 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 LMX1BO60663 402 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ECDO95905 644 aaPredicted RBP12.46□□□□□ -0.41
NXF1-201ENST00000294172 H2AFB2P0C5Z0 115 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 CSRP1P21291 193 aaKnown RBP12.46□□□□□ -0.41
NXF1-201ENST00000294172 FAPQ12884 760 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 TOMM20Q15388 145 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 FCN2Q15485 313 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 TMEM255AQ5JRV8 349 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ZNF468Q5VIY5 522 aaPredicted RBP12.46□□□□□ -0.41
NXF1-201ENST00000294172 KLHL24Q6TFL4 600 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 OR51A2Q8NGJ7 313 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 OR1J4Q8NGS1 313 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 PHF21AQ96BD5 680 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 ANGPTL4Q9BY76 406 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 C1orf198Q9H425 327 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 SLA2Q9H6Q3 261 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 PROK2Q9HC23 129 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
NXF1-201ENST00000294172 PADI1Q9ULC6 663 aa12.46□□□□□ -0.41
NXF1-201ENST00000294172 B4E171 279 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 ACOT7O00154 380 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 SLC17A2O00624 439 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 TCN2P20062 427 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
NXF1-201ENST00000294172 TSPAN7P41732 249 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 AP3S2P59780 193 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 SLC35A1P78382 337 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 SPOCK1Q08629 439 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GLYATL3Q5SZD4 288 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GLT8D1Q68CQ7 371 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 TIGD3Q6B0B8 471 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 FAAP20Q6NZ36 180 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 DEGS2Q6QHC5 323 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 ZNF704Q6ZNC4 412 aaPredicted RBP12.45□□□□□ -0.42
NXF1-201ENST00000294172 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 LUZP2Q86TE4 346 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GTPBP8Q8N3Z3 284 aaPredicted RBP12.45□□□□□ -0.42
NXF1-201ENST00000294172 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 GAL3ST1Q99999 423 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 DKKL1Q9UK85 242 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 AHCTF1Q8WYP5 2266 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 IGHV3-15A0A0B4J1V0 119 aa12.45□□□□□ -0.42
NXF1-201ENST00000294172 AQP7P3A6NL99 342 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms