RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PDSS1Q5T2R2 415 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZNF585AQ6P3V2 769 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GLIPR1L1Q6UWM5 242 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GPR155Q7Z3F1 870 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 AGBL5Q8NDL9 886 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMEM43Q9BTV4 400 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMPRSS13Q9BYE2 586 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 SLA2Q9H6Q3 261 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 DNAJB12Q9NXW2 375 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 STEAP1Q9UHE8 339 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TSC2P49815 1807 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZNF44P15621 663 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PRKACAP17612 351 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 EBPQ15125 230 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 PPA1Q15181 289 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 FAM74A1Q5RGS3 127 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 SPATA46Q5T0L3 261 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 DCAF12Q5T6F0 453 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 WDR88Q6ZMY6 472 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RELL2Q8NC24 303 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 MORN4Q8NDC4 146 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 OR7G1Q8NGA0 311 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 C15orf40Q8WUR7 153 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RAB3CQ96E17 227 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZC3HAV1LQ96H79 300 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 ARHGDIGQ99819 225 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZNF436Q9C0F3 470 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 BCL2L10Q9HD36 194 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 MEPEQ9NQ76 525 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 PLA2G3Q9NZ20 509 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 NXT1Q9UKK6 140 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 TIMM8BQ9Y5J9 83 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 CD3DP04234 171 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 NAT1P18440 290 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ATF1P18846 271 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TBXA2RP21731 343 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 HSD17B7P56937 341 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GABREP78334 506 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 MALLQ13021 153 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RSPO4Q2I0M5 234 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 STAC2Q6ZMT1 411 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CCDC190Q86UF4 302 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZNF679Q8IYX0 411 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 OR6V1Q8N148 313 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 OR2L13Q8N349 312 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 DCBLD2Q96PD2 775 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ALKBH3Q96Q83 286 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 ZNF649Q9BS31 505 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ERVMER34-1Q9H9K5 563 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 INPP5EQ9NRR6 644 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ABRACLQ9P1F3 81 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 KCNAB3O43448 404 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ATP1B1P05026 303 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CSF1P09603 554 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 MSR1P21757 451 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 DDOSTP39656 456 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RPL35P42766 123 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 EPHA4P54764 986 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 UBE2NP61088 152 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 RNF4P78317 190 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 FXNQ16595 210 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 HLA-BQ31612 363 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 RFPL4BQ6ZWI9 263 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 H1FNTQ75WM6 255 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 TPRA1Q86W33 373 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GTPBP8Q8N3Z3 284 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD9Q96BM1 317 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 SMIM19Q96E16 107 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 CLCC1Q96S66 551 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 VRK1Q99986 396 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMEM59Q9BXS4 323 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ADGRL4Q9HBW9 690 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 B4GALT7Q9UBV7 327 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 KCNIP3Q9Y2W7 256 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 IGHV1OR15-9A0A0B4J2B8 117 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 MED19A0JLT2 244 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 OIP5O43482 229 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 LANCL1O43813 399 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ALX3O95076 343 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 UBL3O95164 117 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 IGKV1D-16P01601 117 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 WNT1P04628 370 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PIPP12273 146 aaPredicted RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 IL11P20809 199 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 AGFG1P52594 562 aaKnown RBP4.33□□□□□ -1.72
UBR1-201ENST00000290650 CDK5R1Q15078 307 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 GPR157Q5UAW9 335 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 AAED1Q7RTV5 226 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 FJX1Q86VR8 437 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PDZD9Q8IXQ8 264 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMEM217Q8N7C4 229 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 KIAA1958Q8N8K9 716 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 ADAMTS14Q8WXS8 1223 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TCEAL3Q969E4 200 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PELI1Q96FA3 418 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 SDSLQ96GA7 329 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 PLPPR2Q96GM1 343 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 OR10A2Q9H208 303 aa4.33□□□□□ -1.72
UBR1-201ENST00000290650 TMEM231Q9H6L2 316 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms