RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NOL3O60936 208 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 IL18BPO95998 194 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 OR8G3PP0DMU2 310 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 GADD45AP24522 165 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 OPRM1P35372 400 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 SH3BGRP55822 239 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 OR12D2P58182 307 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ACTA2P62736 377 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ACTG2P63267 376 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 BDH1Q02338 343 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 EIF2B1Q14232 305 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ENDOGQ14249 297 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF684Q5T5D7 378 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 LIPKQ5VXJ0 399 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF813Q6ZN06 617 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 KLBQ86Z14 1044 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 SYS1Q8N2H4 156 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 LRRC18Q8N456 261 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF610Q8N9Z0 462 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 SNX33Q8WV41 574 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ASB17Q8WXJ9 295 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 RPL3LQ92901 407 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 MRPL48Q96GC5 212 aaKnown RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 C4orf36Q96KX1 117 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ABHD6Q9BV23 337 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 TTTY10Q9BZA0 68 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ASH2LQ9UBL3 628 aa16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF629Q9UEG4 869 aaPredicted RBP16.6■□□□□ 0.25
PDLIM3-202ENST00000284770 IGSF10Q6WRI0 2623 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 MT-ND5P03915 603 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 ITGA5P08648 1049 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 EGR3Q06889 387 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 MRPL49Q13405 166 aaKnown RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 AQP6Q13520 282 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 CORO6Q6QEF8 472 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 DCXRQ7Z4W1 244 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 OR2AJ1Q8NGZ0 328 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 ST7LQ8TDW4 575 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 AMELYQ99218 206 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 EPG5Q9HCE0 2579 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 J3QLW9 94 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 MAGEB4O15481 346 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 FARS2O95363 451 aaKnown RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 CST2P09228 141 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 ZNF19P17023 458 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 PCSK6P29122 969 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 KCTD18Q6PI47 426 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 KLHL24Q6TFL4 600 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 VASH1Q7L8A9 365 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 EGFL6Q8IUX8 553 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 GABRG1Q8N1C3 465 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 RND1Q92730 232 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 BBC3Q96PG8 261 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 SH3GL3Q99963 347 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 OPN3Q9H1Y3 402 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 OR51E2Q9H255 320 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 C1orf198Q9H425 327 aa16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 GDF2Q9UK05 429 aaPredicted RBP16.59■□□□□ 0.25
PDLIM3-202ENST00000284770 NCOA6Q14686 2063 aaPredicted RBP16.58■□□□□ 0.25
PDLIM3-202ENST00000284770 RP1L1Q8IWN7 2480 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 IGHV1-2P23083 117 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 CAPZA2P47755 286 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 TGFBR3Q03167 851 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 TP53I3Q53FA7 332 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 ANKRD16Q6P6B7 361 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 PLEKHG7Q6ZR37 379 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 BEND4Q6ZU67 534 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 NCCRP1Q6ZVX7 275 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 KCTD20Q7Z5Y7 419 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 SKA3Q8IX90 412 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 ALDH16A1Q8IZ83 802 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 ZFP41Q8N8Y5 198 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 OR52N5Q8NH56 324 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 UFD1Q92890 307 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 FBXO17Q96EF6 278 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 MAP6Q96JE9 813 aa16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 SF3B6Q9Y3B4 125 aaKnown RBP16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 SIRT4Q9Y6E7 314 aaPredicted RBP16.58■□□□□ 0.24
PDLIM3-202ENST00000284770 POLEQ07864 2286 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 E9PI62 339 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 AIREO43918 545 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 SULT1C4O75897 302 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 ROM1Q03395 351 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 GJC3Q8NFK1 279 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 OR1K1Q8NGR3 316 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 PELI1Q96FA3 418 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 WACQ9BTA9 647 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 KCNN2Q9H2S1 579 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 PIGMQ9H3S5 423 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 TRIM36Q9NQ86 728 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 PTTG2Q9NZH5 202 aa16.57■□□□□ 0.24
PDLIM3-202ENST00000284770 A0A096LPE4 126 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 PNMA8CA0A1B0GUJ8 204 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 A0A1W2PPZ6 126 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 PSMD9O00233 223 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 RER1O15258 196 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 COX5AP20674 150 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 BMP5P22003 454 aa16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 LSM3P62310 102 aaKnown RBP16.56■□□□□ 0.24
PDLIM3-202ENST00000284770 SPCS2Q15005 226 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms