RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CALCBP10092 127 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 ENPP1P22413 925 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 DCTDP32321 178 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 NR4A2P43354 598 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 KIR2DL3P43628 341 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 ZNF133P52736 654 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-201ENST00000269318 RAC3P60763 192 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 CFAP77Q6ZQR2 320 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 ESPNLQ6ZVH7 1005 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 ASB18Q6ZVZ8 466 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 CMTM4Q8IZR5 234 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 CHAC2Q8WUX2 184 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 TMEM54Q969K7 222 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 OR2M2Q96R28 347 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 THAP7Q9BT49 309 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-201ENST00000269318 SEC61A2Q9H9S3 476 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 CENPMQ9NSP4 180 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 GLTPQ9NZD2 209 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 GDF2Q9UK05 429 aaPredicted RBP14.75□□□□□ -0.05
CCDC40-201ENST00000269318 OTOGLQ3ZCN5 2332 aa14.75□□□□□ -0.05
CCDC40-201ENST00000269318 TMEM269A0A1B0GVZ9 245 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 SMAD9O15198 467 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 LRP3O75074 770 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 MAS1P04201 325 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 ADRB1P08588 477 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 FAM157BP0CG42 384 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 CSRP1P21291 193 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 MAP2K3P46734 347 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 CLDN12P56749 244 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 ABHD17BQ5VST6 288 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 TMEM123Q8N131 208 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 ZIC4Q8N9L1 334 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 DEFB124Q8NES8 71 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 RFT1Q96AA3 541 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 ZC3HAV1LQ96H79 300 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 ADGRG7Q96K78 797 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 IP6K3Q96PC2 410 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 SIGLEC12Q96PQ1 595 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 MMP28Q9H239 520 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 RBFOX1Q9NWB1 397 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 FAM206AQ9NX38 181 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 OR5V1Q9UGF6 321 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 CAMK2AQ9UQM7 478 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 NPIPA2E9PIF3 369 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 NPIPA3F8WFD2 350 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 EIF1AYO14602 144 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 NR2C1P13056 603 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 EIF1AXP47813 144 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 AIMP2Q13155 320 aaKnown RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 WIPI1Q5MNZ9 446 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 PHYHD1Q5SRE7 291 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 C10orf128Q5T292 105 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 BAIAP2L2Q6UXY1 529 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 FCRLAQ7L513 359 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.74□□□□□ -0.05
CCDC40-201ENST00000269318 UBE2J2Q8N2K1 259 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 DHDHQ9UQ10 334 aa14.74□□□□□ -0.05
CCDC40-201ENST00000269318 KNTC1P50748 2209 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ANXA2P2A6NMY6 339 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 TTLL8A6PVC2 850 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 LYRM1O43325 122 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ANXA2P07355 339 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 PRKAR1AP10644 381 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ACHEP22303 614 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ITGA3P26006 1051 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 CSNK1A1P48729 337 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 MMP15P51511 669 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 GFRA1P56159 465 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 CARTPTQ16568 116 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ZNF704Q6ZNC4 412 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 RHOUQ7L0Q8 258 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 TMPRSS12Q86WS5 348 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 UBQLNLQ8IYU4 475 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 SFXN2Q96NB2 322 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 SF3B5Q9BWJ5 86 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 HDHD2Q9H0R4 259 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ABCG5Q9H222 651 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 HHLA2Q9UM44 414 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 BOKQ9UMX3 212 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 KIAA1549Q9HCM3 1950 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 LOC107986453A0A1B0GWG9 222 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 EEF1E1O43324 174 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 TRAPPC6AO75865 159 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 FTH1P19P0C7X4 201 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 IGFBP3P17936 291 aaPredicted RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 FSTP19883 344 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 GDF1P27539 372 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 CASRP41180 1078 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 SUCLG1P53597 346 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 CLDN15P56746 228 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 PITPNAQ00169 270 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 FOXL2NBQ6ZUU3 175 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 DTX1Q86Y01 620 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 DUSP18Q8NEJ0 188 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 OR2M7Q8NG81 312 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 FAM173AQ9BQD7 235 aa14.73□□□□□ -0.05
CCDC40-201ENST00000269318 UTP23Q9BRU9 249 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 PNRC2Q9NPJ4 139 aaKnown RBP14.73□□□□□ -0.05
CCDC40-201ENST00000269318 ASH2LQ9UBL3 628 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms