RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TMEM231Q9H6L2 316 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 SEBOXQ9HB31 216 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 MMP25Q9NPA2 562 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 METTL1Q9UBP6 276 aaKnown RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 PILRAQ9UKJ1 303 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 GTF2A1LQ9UNN4 478 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 INSL6Q9Y581 213 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 TP53BP1Q12888 1972 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 DBX1A6NMT0 343 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 DCTN6O00399 190 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 LIPCP11150 499 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 RIDAP52758 137 aaKnown RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 RAB38P57729 211 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 MST1LQ2TV78 715 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 C1orf100Q5SVJ3 147 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 ZNF704Q6ZNC4 412 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 TRAPPC6BQ86SZ2 158 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 FJX1Q86VR8 437 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 ADAMTS17Q8TE56 1095 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 ASB5Q8WWX0 329 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 OIT3Q8WWZ8 545 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 FAM46BQ96A09 425 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 RNF126Q9BV68 326 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 TMED7Q9Y3B3 224 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 KPTNQ9Y664 436 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 SCN3AQ9NY46 2000 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 CPED1A4D0V7 1026 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 WRBO00258 174 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 XKRYO14609 159 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 NARSO43776 548 aaKnown RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 OR6A2O95222 327 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 F13BP05160 661 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 HNRNPA1P09651 372 aaKnown RBP eCLIP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 LYL1P12980 280 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 AKR1C4P17516 323 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 PMELP40967 661 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 RPS21P63220 83 aaKnown RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 ROM1Q03395 351 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 FAM53BQ14153 422 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 MESTQ5EB52 335 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 PRSS54Q6PEW0 395 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 SLC16A13Q7RTY0 426 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 ATG4DQ86TL0 474 aaPredicted RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 CACUL1Q86Y37 369 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 OR4N2Q8NGD1 307 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TCTEX1D2Q8WW35 142 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 SLC25A44Q96H78 314 aaPredicted RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 ZC3H10Q96K80 434 aaKnown RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 VSTM2LQ96N03 204 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 LRRC3BQ96PB8 259 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 AQP10Q96PS8 301 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 RAB18Q9NP72 206 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TMEM74BQ9NUR3 256 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 TAS2R4Q9NYW5 299 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 KCNG2Q9UJ96 466 aa11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 MRPS33Q9Y291 106 aaKnown RBP11.15□□□□□ -0.62
CHMP2B-201ENST00000263780 H0YGG7 62 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 ADH1BP00325 375 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 HLA-DQA2P01906 255 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 S1PR1P21453 382 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 ARF3P61204 181 aaPredicted RBP11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 DEFB103AP81534 67 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 HTRA3P83110 453 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 RPL18Q07020 188 aaKnown RBP11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 CST6Q15828 149 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 SGCAQ16586 387 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 C5orf46Q6UWT4 87 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 TMEFF1Q8IYR6 380 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 JAGN1Q8N5M9 183 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 C14orf79Q96F83 325 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 CPNE2Q96FN4 548 aaPredicted RBP11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 SCARF2Q96GP6 870 aaPredicted RBP11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 SCGB3A2Q96PL1 93 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 TSPAN32Q96QS1 320 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 OR5B2Q96R09 309 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 OR2M4Q96R27 311 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 LPAR4Q99677 370 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 GAL3ST1Q99999 423 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 SULT4A1Q9BR01 284 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 HHLA2Q9UM44 414 aa11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 MRPS18BQ9Y676 258 aaKnown RBP11.15□□□□□ -0.63
CHMP2B-201ENST00000263780 C4orf47A7E2U8 309 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 MBTPS2O43462 519 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 CD5P06127 495 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 CEBPBP17676 345 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 C5AR1P21730 350 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 RABIFP47224 123 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 CSNK1EP49674 416 aaKnown RBP11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 GSK3AP49840 483 aa11.14□□□□□ -0.63
CHMP2B-201ENST00000263780 DVL1P1P54792 670 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms