RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SLC16A1P53985 500 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 B3GALT5-AS1P59052 145 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 ACSM1Q08AH1 577 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 SPCS2Q15005 226 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 PON3Q15166 354 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 MS4A18Q3C1V0 323 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 BEX5Q5H9J7 111 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 USP43Q70EL4 1123 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 LHFPL3Q86UP9 236 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 KLHL36Q8N4N3 616 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ARIH2OSQ8N7S6 290 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 TMEM99Q8N816 258 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 CNEP1R1Q8N9A8 125 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 POMGNT2Q8NAT1 580 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ATP6V1C2Q8NEY4 427 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 ZNF519Q8TB69 540 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 OPN3Q9H1Y3 402 aaPredicted RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 MOKQ9UQ07 419 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 CAB39Q9Y376 341 aaPredicted RBP11.69□□□□□ -0.54
SGCA-201ENST00000262018 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
SGCA-201ENST00000262018 H3BML4 177 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 AIREO43918 545 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 RENP00797 406 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 CPEP16870 476 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 AHCYP23526 432 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ACTC1P68032 377 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ACTA1P68133 377 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 PUDPQ08623 228 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 TPBGQ13641 420 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 GALEQ14376 348 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ZNF239Q16600 458 aaKnown RBP11.68□□□□□ -0.54
SGCA-201ENST00000262018 LINC01590Q5TEZ4 76 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 VWA1Q6PCB0 445 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ADGRE4PQ86SQ3 457 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ADCK1Q86TW2 530 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 OR5M1Q8NGP8 315 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ZNRF4Q8WWF5 429 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 RPL3LQ92901 407 aaKnown RBP11.68□□□□□ -0.54
SGCA-201ENST00000262018 PPP1R14BQ96C90 147 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 STARD4Q96DR4 205 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 UCN2Q96RP3 112 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 DCUN1D5Q9BTE7 237 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 ELOVL5Q9NYP7 299 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 CLCF1Q9UBD9 225 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 TRAPPC4Q9Y296 219 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 B3GALT5Q9Y2C3 310 aa11.68□□□□□ -0.54
SGCA-201ENST00000262018 A0A1W2PRG6 482 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 DAPL1A0PJW8 107 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 OVOL3O00110 214 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 MRPL3P09001 348 aaKnown RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 ZNF12P17014 697 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 SRD5A1P18405 259 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 CDKN1AP38936 164 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 DBPQ10586 325 aaPredicted RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 BCL2A1Q16548 175 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 TMPRSS11AQ6ZMR5 421 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 SPRYD4Q8WW59 207 aaPredicted RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 GATAD2BQ8WXI9 593 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 AKAP1Q92667 903 aaKnown RBP eCLIP11.67□□□□□ -0.54
SGCA-201ENST00000262018 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 CNN2Q99439 309 aaKnown RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 ALG8Q9BVK2 526 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 RPRD1BQ9NQG5 326 aaKnown RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 NDUFB11Q9NX14 153 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 VSX1Q9NZR4 365 aaPredicted RBP11.67□□□□□ -0.54
SGCA-201ENST00000262018 NOX1Q9Y5S8 564 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 TGP01266 2768 aa11.67□□□□□ -0.54
SGCA-201ENST00000262018 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 XKRYO14609 159 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 SERPINI2O75830 405 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 PMS2P2O95744 297 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 TGM6O95932 706 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 TFP02787 698 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 OR2T7P0C7T2 308 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 ZNF182P17025 639 aaPredicted RBP11.66□□□□□ -0.54
SGCA-201ENST00000262018 CFPP27918 469 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 SHC1P29353 583 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 LHX2P50458 406 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 VBP1P61758 197 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 SIRPAP78324 504 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 BDH1Q02338 343 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 ZNF85Q03923 595 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 ZNF846Q147U1 533 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 TMEM249Q2WGJ8 235 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 TMEM176BQ3YBM2 270 aaPredicted RBP11.66□□□□□ -0.54
SGCA-201ENST00000262018 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 NHLRC1Q6VVB1 395 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 P4HA3Q7Z4N8 544 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 OR10H4Q8NGA5 316 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 OR51L1Q8NGJ5 315 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 OR2T4Q8NH00 348 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 OR2T27Q8NH04 317 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 TBC1D15Q8TC07 691 aa11.66□□□□□ -0.54
SGCA-201ENST00000262018 ASB10Q8WXI3 467 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms