RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HRH1P35367 487 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 GPR143P51810 404 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 IL10RAQ13651 578 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ZNF74Q16587 644 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 PTCRAQ6ISU1 281 aaPredicted RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 ANKRD16Q6P6B7 361 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 OR13C8Q8NGS7 320 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 OR6N1Q8NGY5 312 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 DCUN1D4Q92564 292 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 BMFQ96LC9 184 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 INTS14Q96SY0 518 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 NICN1Q9BSH3 213 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 PITHD1Q9GZP4 211 aaPredicted RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 NXF5Q9H1B4 397 aaKnown RBP11.69□□□□□ -0.54
SNX1-201ENST00000261889 GMEB2Q9UKD1 530 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 ABCA7Q8IZY2 2146 aa11.69□□□□□ -0.54
SNX1-201ENST00000261889 SNRPGP15A8MWD9 76 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SDCBPO00560 298 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 SPP1P10451 314 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 CD53P19397 219 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 NPY4RP50391 375 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 PPIAP62937 165 aaKnown RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 IL13RA1P78552 427 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 DMWDQ09019 674 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 VSTM2LQ96N03 204 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 ZNF578Q96N58 590 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 BANF2Q9H503 90 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 HEBP2Q9Y5Z4 205 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 DCHS1Q96JQ0 3298 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 TACSTD2P09758 323 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RCC1P18754 421 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 ALOX5APP20292 161 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 PSMD4P55036 377 aaKnown RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 ZNF684Q5T5D7 378 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 H3F3CQ6NXT2 135 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 COX15Q7KZN9 410 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SLC16A9Q7RTY1 509 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 TAF8Q7Z7C8 310 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RRNAD1Q96FB5 475 aaKnown RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 C4orf45Q96LM5 186 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SEMA6CQ9H3T2 930 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SFXN1Q9H9B4 322 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 MMP25Q9NPA2 562 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 GDE1Q9NZC3 331 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 DHDHQ9UQ10 334 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 IGHV3-20A0A0C4DH32 117 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RFPL4AA6NLU0 287 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RFPL4AL1F8VTS6 287 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SLC33A1O00400 549 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 ERCC1P07992 297 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 CSF2RBP32927 897 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 FGL1Q08830 312 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 ALG11Q2TAA5 492 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 TTLL10Q6ZVT0 673 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 OR51F2Q8NH61 342 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 THAP6Q8TBB0 222 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 MARCH1Q8TCQ1 289 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 SLC2A12Q8TD20 617 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 METTL21AQ8WXB1 218 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RLN3Q8WXF3 142 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 NMNAT2Q9BZQ4 307 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 DUSP15Q9H1R2 295 aaPredicted RBP11.68□□□□□ -0.54
SNX1-201ENST00000261889 OR10A5Q9H207 317 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 RNF215Q9Y6U7 377 aa11.68□□□□□ -0.54
SNX1-201ENST00000261889 LINC01565O15544 149 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 KLF8O95600 359 aaPredicted RBP11.67□□□□□ -0.54
SNX1-201ENST00000261889 SERPINA5P05154 406 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 CSF1P09603 554 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 SMIM10L1P0DMW3 83 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 HOXB2P14652 356 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 ADH6P28332 368 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 PRKXP51817 358 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 SNTB1Q13884 538 aaKnown RBP11.67□□□□□ -0.54
SNX1-201ENST00000261889 CCINQ13939 588 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 HFEQ30201 348 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 FAM122BQ7Z309 247 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 TRAPPC6BQ86SZ2 158 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 OR13H1Q8NG92 308 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 NANPQ8TBE9 248 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 SMIM10Q96HG1 83 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 DGAT2Q96PD7 388 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.67□□□□□ -0.54
SNX1-201ENST00000261889 MED29Q9NX70 200 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 COA3Q9Y2R0 106 aaPredicted RBP11.67□□□□□ -0.54
SNX1-201ENST00000261889 CSAG2Q9Y5P2 127 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 BET1O15155 118 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 IL5P05113 134 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 DNASE1L1P49184 302 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 S100A10P60903 97 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 TMEM225Q6GV28 225 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 OR13C3Q8NGS6 347 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 TM4SF19Q96DZ7 209 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 SPSB2Q99619 263 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 MAP3K3Q99759 626 aa11.67□□□□□ -0.54
SNX1-201ENST00000261889 BARX1Q9HBU1 254 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms