RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PDP1Q9P0J1 537 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 MOKQ9UQ07 419 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM272A0A1B0GTI8 110 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 WNT9BO14905 357 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SSX5O60225 188 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CER1O95813 267 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CD8AP01732 235 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CDH3P22223 829 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SDC2P34741 201 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 MPIP34949 423 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CRISP1P54107 249 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PNLIPRP2P54317 469 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TAS2R41P59536 307 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 GPAT3Q53EU6 434 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SMARCD3Q6STE5 483 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CREB3L2Q70SY1 520 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 Q8NFD4 153 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 BPIFA2Q96DR5 249 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SPACA9Q96E40 222 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ADAT3Q96EY9 351 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CLK4Q9HAZ1 481 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ACOXLQ9NUZ1 547 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 FBXO9Q9UK97 447 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PAIP2BQ9ULR5 123 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SSR3Q9UNL2 185 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 B3GALT5Q9Y2C3 310 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 IFT52Q9Y366 437 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 FAT1Q14517 4588 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 IGKV1-6A0A0C4DH72 117 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 K7ENP7 123 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF735P0CB33 412 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PRKAR1AP10644 381 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SPI1P17947 270 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 POU4F2Q12837 409 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CDK5R1Q15078 307 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 UBE2V2Q15819 145 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CRTC2Q53ET0 693 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PLAC9Q5JTB6 97 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 VWA1Q6PCB0 445 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 INO80CQ6PI98 192 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF550Q7Z398 422 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CCDC190Q86UF4 302 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF614Q8N883 585 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC22A8Q8TCC7 542 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 MIB2Q96AX9 1013 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 DERL3Q96Q80 235 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZFP57Q9NU63 452 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 NOX1Q9Y5S8 564 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 GNB5O14775 395 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SNX4O95219 450 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PAHP00439 452 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TTRP02766 147 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PSMA1P25786 263 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 DNAJA1P31689 397 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC1A3P43003 542 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 RPS5P46782 204 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PTH2RP49190 550 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ADAM8P78325 824 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TPBGQ13641 420 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM42Q69YG0 159 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF813Q6ZN06 617 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 P4HA3Q7Z4N8 544 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 DNAJA4Q8WW22 397 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CDCP1Q9H5V8 836 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 MTHFD2LQ9H903 347 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ENPP5Q9UJA9 477 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PRELID3BQ9Y3B1 194 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 OR6C6A6NF89 314 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PYCARD-AS1I3L0S3 204 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 FLRT2O43155 660 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 THRBP10828 461 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 RBMS1P29558 406 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TRIM16LQ309B1 348 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ACER2Q5QJU3 275 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 HIST2H2BCQ6DN03 193 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 C5orf46Q6UWT4 87 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 GPAT4Q86UL3 456 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ANKRD13BQ86YJ7 626 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC43A2Q8N370 569 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 FTMTQ8N4E7 242 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 C11orf65Q8NCR3 313 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 OR5K1Q8NHB7 308 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF671Q8TAW3 534 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 CCDC107Q8WV48 283 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 COL26A1Q96A83 441 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 STARD4Q96DR4 205 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 MARS2Q96GW9 593 aaKnown RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ASPNQ9BXN1 380 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 TTTY12Q9BZ98 90 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ULBP3Q9BZM4 244 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 PNPLA3Q9NST1 481 aa4.87□□□□□ -1.63
TOPBP1-201ENST00000260810 SMIM30A4D0T7 59 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 ATF1P18846 271 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RPL4P36578 427 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 IDH2P48735 452 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 RGS6P49758 472 aa4.86□□□□□ -1.63
TOPBP1-201ENST00000260810 DCDP81605 110 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms