RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 EMX1Q04741 257 aaPredicted RBP18.1■□□□□ 0.49
RTCA-201ENST00000260563 HIKESHIQ53FT3 197 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 TIMM23BQ5SRD1 257 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 OTPQ5XKR4 325 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 P2RY8Q86VZ1 359 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 CDC20BQ86Y33 519 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 OR10H5Q8NGA6 315 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 BOD1Q96IK1 185 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 YIPF3Q9GZM5 350 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 POLE4Q9NR33 117 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 ERVK13-1Q9NX77 482 aa18.1■□□□□ 0.49
RTCA-201ENST00000260563 DAPL1A0PJW8 107 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 FARS2O95363 451 aaKnown RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 SCG5P05408 212 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 NPR2P20594 1047 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 PCMT1P22061 227 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 MAP2K4P45985 399 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 UBE2NP61088 152 aaKnown RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 KCNMB1Q16558 191 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 NRN1LQ496H8 165 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 MEX3BQ6ZN04 569 aaKnown RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 KCTD8Q6ZWB6 473 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 DPY19L4Q7Z388 723 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 DMRTC2Q8IXT2 367 aaPredicted RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 LINC01560Q8TB33 94 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 BCL2L2Q92843 193 aaPredicted RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 PSMG3-AS1Q96PY0 264 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 MNTQ99583 582 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 SLC17A5Q9NRA2 495 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 CLEC2DQ9UHP7 191 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 ERGIC3Q9Y282 383 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 AMDHD2Q9Y303 409 aa18.09■□□□□ 0.49
RTCA-201ENST00000260563 ANKHD1Q8IWZ3 2542 aaKnown RBP18.09■□□□□ 0.49
RTCA-201ENST00000260563 A0A1W2PQL4 384 aaPredicted RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 SPARCP09486 303 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 LIMS3P0CW19 117 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 LIMS4P0CW20 117 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 OR8G3PP0DMU2 310 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 PSKH1P11801 424 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 RPS27P42677 84 aaKnown RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 KIR2DL3P43628 341 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 CAPZA2P47755 286 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 MRPS34P82930 218 aaKnown RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 TAB1Q15750 504 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 TBCEQ15813 527 aaPredicted RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 TEX30Q5JUR7 227 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 LHFPL3Q86UP9 236 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 SLC22A24Q8N4F4 322 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 OR52N5Q8NH56 324 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 NANOS1Q8WY41 292 aaKnown RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 HSD17B8Q92506 261 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 HTRA1Q92743 480 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 NABP1Q96AH0 204 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 MUCL1Q96DR8 90 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 ZC3HAV1LQ96H79 300 aaKnown RBP18.08■□□□□ 0.49
RTCA-201ENST00000260563 WFIKKN1Q96NZ8 548 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 ZNF649Q9BS31 505 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 SLC24A3Q9HC58 644 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 VCX3AQ9NNX9 186 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 OBP2BQ9NPH6 170 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 ACOT13Q9NPJ3 140 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 COPS3Q9UNS2 423 aa18.08■□□□□ 0.49
RTCA-201ENST00000260563 A0A1W2PR80 420 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 ZNF670-ZNF695F2Z2N8 137 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 MYL12BO14950 172 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 MSR1P21757 451 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 ZNF85Q03923 595 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 PPA1Q15181 289 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 SGCAQ16586 387 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 PCK2Q16822 640 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 SSX8Q7RTT4 187 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 RFLNBQ8N5W9 214 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 NANOGP1Q8N7R0 232 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 ACBD4Q8NC06 268 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 OTOSQ8NHW6 89 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 ALG8Q9BVK2 526 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 MND1Q9BWT6 205 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 CDADC1Q9BWV3 514 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 EMC7Q9NPA0 242 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 KCNG2Q9UJ96 466 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 LAMP5Q9UJQ1 280 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 TMEM14AQ9Y6G1 99 aa18.08■□□□□ 0.48
RTCA-201ENST00000260563 USP9YO00507 2555 aaPredicted RBP18.07■□□□□ 0.48
RTCA-201ENST00000260563 ARPC4-TTLL3A0A0A6YYG9 625 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 TMEM129A0AVI4 362 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 TMCC2O75069 709 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 WNT11O96014 354 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 PTHP01270 115 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 HOXB1P14653 301 aaPredicted RBP18.07■□□□□ 0.48
RTCA-201ENST00000260563 LSM6P62312 80 aaKnown RBP18.07■□□□□ 0.48
RTCA-201ENST00000260563 GALEQ14376 348 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 NEDD8Q15843 81 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 XAF1Q6GPH4 301 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 CCDC36Q8IYA8 594 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 DACH2Q96NX9 599 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 SPOCK3Q9BQ16 436 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 SIAEQ9HAT2 523 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 CRIM1Q9NZV1 1036 aa18.07■□□□□ 0.48
RTCA-201ENST00000260563 PLEKHB1Q9UF11 243 aaPredicted RBP18.07■□□□□ 0.48
RTCA-201ENST00000260563 UTP20O75691 2785 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms