RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LOXP28300 417 aaPredicted RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 RUNX1T1Q06455 604 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 TSTQ16762 297 aaKnown RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 TBRG1Q3YBR2 411 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 C1QTNF12Q5T7M4 302 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 LINC00471Q8N535 108 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 CHAC2Q8WUX2 184 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 MRPL13Q9BYD1 178 aaKnown RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 RACGAP1Q9H0H5 632 aa14.67□□□□□ -0.06
SDCBP-201ENST00000260130 ZNF346Q9UL40 294 aaKnown RBP14.67□□□□□ -0.06
SDCBP-201ENST00000260130 LRBAP50851 2863 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 ALPK2Q86TB3 2170 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 HRNRQ86YZ3 2850 aaPredicted RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 UNC119BA6NIH7 251 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 CENPBD1B2RD01 187 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 IGHMP01871 453 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 RPL4P36578 427 aaKnown RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 CLRN1P58418 232 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 RPL27P61353 136 aaKnown RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 C1orf94Q6P1W5 598 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 KLHL24Q6TFL4 600 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 CEP19Q96LK0 163 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 HS3ST6Q96QI5 342 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 CCDC32Q9BV29 185 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 NDEL1Q9GZM8 345 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 ESRP2Q9H6T0 727 aaKnown RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 A0A075B6Q4 140 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 A0A096LPE4 126 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 A0A1W2PPR1 153 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 A0A1W2PPZ6 126 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 M0R129 80 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 NDUFB2O95178 105 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 GASTP01350 101 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 HOXB1P14653 301 aaPredicted RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 HIST3H3Q16695 136 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 LRFN4Q6PJG9 635 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 CCDC190Q86UF4 302 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 OR5M11Q96RB7 305 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 KATNB1Q9BVA0 655 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 PLEKHF2Q9H8W4 249 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 MOV10Q9HCE1 1003 aaKnown RBP14.66□□□□□ -0.06
SDCBP-201ENST00000260130 OBP2BQ9NPH6 170 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 NPAP1Q9NZP6 1156 aa14.66□□□□□ -0.06
SDCBP-201ENST00000260130 WNT11O96014 354 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 CD14P08571 375 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 QDPRP09417 244 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 FPR3P25089 353 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 SLC15A1P46059 708 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 ERVK-25P63136 954 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 NCMAPQ5T1S8 102 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 MEDAGQ5VYS4 303 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 PGBD2Q6P3X8 592 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 SYT14Q8NB59 555 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 NOXO1Q8NFA2 376 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 GNPDA2Q8TDQ7 276 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 TSPAN32Q96QS1 320 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 NELFAQ9H3P2 528 aa14.65□□□□□ -0.06
SDCBP-201ENST00000260130 GSTT2P0CG29 244 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 GSTT2BP0CG30 244 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ACVR1BP36896 505 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 UBE2NP61088 152 aaKnown RBP14.64□□□□□ -0.07
SDCBP-201ENST00000260130 SNRPGP62308 76 aaKnown RBP14.64□□□□□ -0.07
SDCBP-201ENST00000260130 TSPAN31Q12999 210 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF770Q6IQ21 691 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-201ENST00000260130 CCBE1Q6UXH8 406 aaPredicted RBP14.64□□□□□ -0.07
SDCBP-201ENST00000260130 GDPGP1Q6ZNW5 385 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 MCHR2Q969V1 340 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 C1QTNF6Q9BXI9 259 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ABCA4P78363 2273 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 TEX15Q9BXT5 2789 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 DPRXA6NFQ7 191 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 OSMP13725 252 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 SPNP16150 400 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 POU1F1P28069 291 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF83P51522 516 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 FXYD6P3P58550 94 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 FAM205BPQ63HN1 556 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 SMARCD3Q6STE5 483 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF627Q7L945 461 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ARIH2OSQ8N7S6 290 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 NRGNQ92686 78 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 KCNK17Q96T54 332 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 FOXB1Q99853 325 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 SLC30A2Q9BRI3 323 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 TMEM204Q9BSN7 226 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 SLC25A19Q9HC21 320 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 GRHPRQ9UBQ7 328 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 IL20RAQ9UHF4 553 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 MGAT4BQ9UQ53 548 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ADAM18Q9Y3Q7 739 aa14.64□□□□□ -0.07
SDCBP-201ENST00000260130 ARPC4-TTLL3A0A0A6YYG9 625 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 A6NIZ1 184 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 DHHO43323 396 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 SCG5P05408 212 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 CD3EP07766 207 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 RAP1BP61224 184 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 RAP1AP62834 184 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 BSPH1Q075Z2 132 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 THSD4Q6ZMP0 1018 aa14.63□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF813Q6ZN06 617 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms