RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 DEFB124Q8NES8 71 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 OR5L2Q8NGL0 311 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 SLC22A8Q8TCC7 542 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 GPR148Q8TDV2 347 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 GIMAP1Q8WWP7 306 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 PELOQ9BRX2 385 aaKnown RBP8.13□□□□□ -1.11
CKAP2-201ENST00000258607 GPR27Q9NS67 375 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 KLHL21Q9UJP4 597 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 WIF1Q9Y5W5 379 aa8.13□□□□□ -1.11
CKAP2-201ENST00000258607 FAM230AA0A1W2PPH8 454 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 OR2M5A3KFT3 312 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 NOTOA8MTQ0 251 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 PLPP2O43688 288 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CD2P06729 351 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 ARSBP15848 533 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 ALOX5APP20292 161 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 DDOSTP39656 456 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 KIR3DL2P43630 455 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 ZXDAP98168 799 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 TMEM44Q2T9K0 475 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF544Q6NX49 715 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 SLC23A3Q6PIS1 610 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 FAM198BQ6UWH4 519 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 GDPGP1Q6ZNW5 385 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CFAP77Q6ZQR2 320 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 FAM122BQ7Z309 247 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 BEST3Q8N1M1 668 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 DDIT4LQ96D03 193 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 S100A16Q96FQ6 103 aaKnown RBP8.12□□□□□ -1.11
CKAP2-201ENST00000258607 SEC22AQ96IW7 307 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 P4HTMQ9NXG6 502 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 FBXO4Q9UKT5 387 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CSAG2Q9Y5P2 127 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CACNG2Q9Y698 323 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 TMEM200CA6NKL6 621 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 FABP7O15540 132 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 BGLAPP02818 100 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 P04436 131 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 RBM34P42696 430 aaKnown RBP8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CCL11P51671 97 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 RPS11P62280 158 aaKnown RBP eCLIP8.12□□□□□ -1.11
CKAP2-201ENST00000258607 Q499Y3 187 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 DCAF12Q5T6F0 453 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 OLFML2AQ68BL7 652 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 WDR74Q6RFH5 385 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-201ENST00000258607 SLC16A9Q7RTY1 509 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 NR4A3Q92570 626 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 PSD2Q9BQI7 771 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 CKLFQ9UBR5 152 aa8.12□□□□□ -1.11
CKAP2-201ENST00000258607 C19orf25Q9UFG5 118 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-201ENST00000258607 A0A0A6YYJ9 748 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 MS4A18H0YCH9 400 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 FADS1O60427 444 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 MRPS14O60783 128 aaKnown RBP8.11□□□□□ -1.11
CKAP2-201ENST00000258607 HPXP02790 462 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SERPINA2P20848 420 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 DUSP1P28562 367 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 TSC22D1Q15714 1073 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 MS4A18Q3C1V0 323 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 MOGAT2Q3SYC2 334 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 Q5BKY6 102 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 KCTD9Q7L273 389 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 PLCZ1Q86YW0 608 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 TNFAIP8L1Q8WVP5 186 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SLAMF6Q96DU3 332 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF426Q9BUY5 554 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 EDEM2Q9BV94 578 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SELENOIQ9C0D9 397 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 B3GNT3Q9Y2A9 372 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 NOTCH2Q04721 2471 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SDCBPO00560 298 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ORC5O43913 435 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 CER1O95813 267 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 UMODP07911 640 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 FAHP16930 419 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF20P17024 532 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF81P51508 661 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SSR4P51571 173 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SPATA46Q5T0L3 261 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 GRAMD2AQ8IUY3 354 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF440Q8IYI8 595 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 MAML2Q8IZL2 1156 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-201ENST00000258607 WDSUB1Q8N9V3 476 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 OR52N4Q8NGI2 321 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 OTOSQ8NHW6 89 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 TMEM43Q9BTV4 400 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 LDAHQ9H6V9 325 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 CPNE5Q9HCH3 593 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 LRFN1Q9P244 771 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF230Q9UIE0 474 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-201ENST00000258607 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 TP53I11O14683 189 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 GABRR1P24046 479 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 RAD52P43351 418 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 SLC6A8P48029 635 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ART1P52961 327 aa8.11□□□□□ -1.11
CKAP2-201ENST00000258607 ARFIP1P53367 373 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms