RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 GABRA5P31644 462 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 LILRB2Q8N423 598 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 OR6X1Q8NH79 312 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 TTTY10Q9BZA0 68 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 ETAA1Q9NY74 926 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 OSGIN1Q9UJX0 560 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 OR5B21A6NL26 309 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 H7C2Y5 167 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 ACOT8O14734 319 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 CD160O95971 181 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 KIR2DS2P43631 304 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 KCNJ3P48549 501 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 MTNR1BP49286 362 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 FXYD6P3P58550 94 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 RPL18Q07020 188 aaKnown RBP12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 PIGFQ07326 219 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 VN1R4Q7Z5H5 301 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 CNRIP1Q96F85 164 aaPredicted RBP12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 ZCCHC4Q9H5U6 513 aa12.12□□□□□ -0.47
PRPF38A-201ENST00000257181 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 B8ZZF3 427 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 PPIHO43447 177 aaKnown RBP12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 IL1AP01583 271 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 CD8BP10966 210 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 DLX5P56178 289 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 RAB1AP62820 205 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC22A6Q4U2R8 563 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 CNIH3Q8TBE1 160 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 RAB3CQ96E17 227 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 REEP6Q96HR9 211 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 NMNAT3Q96T66 252 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 UBQLN3Q9H347 655 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 HEXA-AS1Q9H8Q6 139 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 A0A1W2PNR3 127 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 SOD1P00441 154 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ASCL1P50553 236 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 GNG3P63215 75 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC25A45Q8N413 288 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 OPALINQ96PE5 141 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 AMBRA1Q9C0C7 1298 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 UBTD1Q9HAC8 227 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 NOTOA8MTQ0 251 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 SPINT1O43278 529 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 RAB7AP51149 207 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 PCDHGA9Q9Y5G4 932 aaKnown RBP12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ANKRD33BA6NCL7 494 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 PRR19A6NJB7 356 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 AMY2AP04746 511 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 PRKACAP17612 351 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 HOXC5Q00444 222 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 FXNQ16595 210 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 C6orf89Q6UWU4 347 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 KCTD9Q7L273 389 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF679Q8IYX0 411 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 JMJD8Q96S16 334 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 NTMQ9P121 344 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
PRPF38A-201ENST00000257181 C13orf42A0A1B0GVH6 325 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 FAM171A2A8MVW0 826 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 GAPDHSO14556 408 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CELA2BP08218 269 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TNFAIP6P98066 277 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 LAPTM4AQ15012 233 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 MEP1BQ16820 701 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 STEAP3Q658P3 488 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ROBO4Q8WZ75 1007 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ANKRD9Q96BM1 317 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ANGPTL4Q9BY76 406 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 C1RLQ9NZP8 487 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 RHBDD3Q9Y3P4 386 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 AQP7P3A6NL99 342 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TMEM210A6NLX4 147 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CST2P09228 141 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CDK5R2Q13319 367 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 C22orf42Q6IC83 251 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SHISA5Q8N114 240 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 TTTY12Q9BZ98 90 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 SLC25A18Q9H1K4 315 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 ZNF701M0R085 212 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 MFGE8Q08431 387 aaPredicted RBP12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 FZD5Q13467 585 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 IGFBP7Q16270 282 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 PTP4A1Q93096 173 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 LRRC3BQ96PB8 259 aa12.1□□□□□ -0.47
PRPF38A-201ENST00000257181 MBOAT4Q96T53 435 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms