RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 OR2T33Q8NG76 320 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 OR52E2Q8NGJ4 325 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 OR8D4Q8NGM9 314 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 OR4K13Q8NH42 304 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 C10orf105Q8TEF2 133 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 GIPC3Q8TF64 312 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 IPCEF1Q8WWN9 437 aaPredicted RBP10.97□□□□□ -0.65
VPREB3-201ENST00000248948 SYT3Q9BQG1 590 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 PIMREGQ9BSJ6 248 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 REG4Q9BYZ8 158 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 HDHD2Q9H0R4 259 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 MS4A5Q9H3V2 200 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 RERGLQ9H628 205 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 RPRD1BQ9NQG5 326 aaKnown RBP10.97□□□□□ -0.65
VPREB3-201ENST00000248948 EIF3KQ9UBQ5 218 aaKnown RBP10.97□□□□□ -0.65
VPREB3-201ENST00000248948 CGGBP1Q9UFW8 167 aaPredicted RBP10.97□□□□□ -0.65
VPREB3-201ENST00000248948 GPR160Q9UJ42 338 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 POLR1DQ9Y2S0 133 aa10.97□□□□□ -0.65
VPREB3-201ENST00000248948 RTTNQ86VV8 2226 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 A0A096LNT2 108 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 LOC390937A0A1W2PQ73 354 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 OR6C6A6NF89 314 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 GNGT2O14610 69 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 E2F6O75461 281 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 LCKP06239 509 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 IGFBP1P08833 259 aaPredicted RBP10.96□□□□□ -0.65
VPREB3-201ENST00000248948 CCNOP22674 350 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 TUBG1P23258 451 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 HTR5AP47898 357 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 CBX1P83916 185 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 PPP1R8Q12972 351 aaKnown RBP10.96□□□□□ -0.65
VPREB3-201ENST00000248948 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 OR1J1Q8NGS3 322 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 SYNPRQ8TBG9 265 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 SNX33Q8WV41 574 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 DNAJC9Q8WXX5 260 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 C11orf40Q8WZ69 217 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 FOXN4Q96NZ1 517 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 TSSK2Q96PF2 358 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 DCLRE1CQ96SD1 692 aaKnown RBP10.96□□□□□ -0.65
VPREB3-201ENST00000248948 SMR3AQ99954 134 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 OR51B6Q9H340 312 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 GSX1Q9H4S2 264 aaPredicted RBP10.96□□□□□ -0.65
VPREB3-201ENST00000248948 ELOVL3Q9HB03 270 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 SLCO1C1Q9NYB5 712 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 PLEK2Q9NYT0 353 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 MYEF2Q9P2K5 600 aaKnown RBP10.96□□□□□ -0.65
VPREB3-201ENST00000248948 DNAJB9Q9UBS3 223 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 KCNG2Q9UJ96 466 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 KLHL21Q9UJP4 597 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 B9D1Q9UPM9 204 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 ZFHX3Q15911 3703 aa10.96□□□□□ -0.65
VPREB3-201ENST00000248948 HIVEP2P31629 2446 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 NAV3Q8IVL0 2385 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 OR6C68A6NDL8 312 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 VWC2LB2RUY7 222 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 DEAF1O75398 565 aaPredicted RBP10.95□□□□□ -0.66
VPREB3-201ENST00000248948 LY6HO94772 140 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 SOX14O95416 240 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ABHD16AO95870 558 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 IFNGP01579 166 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 MT-ND5P03915 603 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 TP53P04637 393 aaPredicted RBP10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ADRA2AP08913 450 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ARHGDIAP52565 204 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ERVS71-1P61550 626 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 HIST1H3AP68431 136 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 LOXL1Q08397 574 aaPredicted RBP10.95□□□□□ -0.66
VPREB3-201ENST00000248948 MOGQ16653 247 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 NKPD1Q17RQ9 610 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 HIST2H3PS2Q5TEC6 136 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 MBNL2Q5VZF2 373 aaKnown RBP10.95□□□□□ -0.66
VPREB3-201ENST00000248948 HIST2H3AQ71DI3 136 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 GJC3Q8NFK1 279 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 OR2T4Q8NH00 348 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 OR4Q3Q8NH05 313 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 COG8Q96MW5 612 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 DDOQ99489 341 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 FEVQ99581 238 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 COQ7Q99807 217 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 NIPSNAP1Q9BPW8 284 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 TSSK6Q9BXA6 273 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 FN3KQ9H479 309 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 TBCCD1Q9NVR7 557 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 REV1Q9UBZ9 1251 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 DUSP13Q9UII6 198 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 LHFPL6Q9Y693 200 aa10.95□□□□□ -0.66
VPREB3-201ENST00000248948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPREB3-201ENST00000248948 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 CSPG4Q6UVK1 2322 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 MPZL1O95297 269 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 LY6G6DO95868 133 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 IGHV3-13P01766 116 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 DAOP14920 347 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 ZNF3P17036 446 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 GIFP27352 417 aa10.94□□□□□ -0.66
VPREB3-201ENST00000248948 GCH1P30793 250 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms