RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PRSS45Q7RTY3 260 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 UCN2Q96RP3 112 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 C1orf198Q9H425 327 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 EMC7Q9NPA0 242 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 DEPPQ9NTK1 212 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 MRPS18BQ9Y676 258 aaKnown RBP16.42■□□□□ 0.22
HOXC11-201ENST00000243082 KMT2EQ8IZD2 1858 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 IGHV3-15A0A0B4J1V0 119 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 LRRC3CA6NJW4 275 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 GSTZ1O43708 216 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 DOK2O60496 412 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 ISG15P05161 165 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 RFPL3SP0C7P2 107 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CFPP27918 469 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 DDOSTP39656 456 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 EIF1AXP47813 144 aaKnown RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 MMP16P51512 607 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 AGFG1P52594 562 aaKnown RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 TOMM20Q15388 145 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CREB3L2Q70SY1 520 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 SYNPRQ8TBG9 265 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 THOC3Q96J01 351 aaKnown RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 AHCTF1Q8WYP5 2266 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 LOC101059948A0A1B0GTJ6 334 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 TNFSF11O14788 317 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 SLC6A1P30531 599 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CYB561P49447 251 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CLDN20P56880 219 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CSNK2A1P68400 391 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 POU4F3Q15319 338 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 RNASE12Q5GAN4 147 aaKnown RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 CFAP77Q6ZQR2 320 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 YRDCQ86U90 279 aaKnown RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 SERPINA12Q8IW75 414 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 SLC39A7Q92504 469 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 UPRTQ96BW1 309 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 FAM206AQ9NX38 181 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 STMN3Q9NZ72 180 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 RABL2AQ9UBK7 228 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 STEAP1Q9UHE8 339 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 GDF2Q9UK05 429 aaPredicted RBP16.41■□□□□ 0.22
HOXC11-201ENST00000243082 HHLA2Q9UM44 414 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 RABL2BQ9UNT1 228 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 ETV7Q9Y603 341 aa16.41■□□□□ 0.22
HOXC11-201ENST00000243082 DOCK10Q96BY6 2186 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 KNTC1P50748 2209 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 CCNKO75909 580 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 VAMP5O95183 116 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 IGFBP3P17936 291 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 DCTDP32321 178 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 BTCP35070 178 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 KCNMB1Q16558 191 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 RSBN1Q5VWQ0 802 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 SMIM4Q8WVI0 70 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 RAB40AQ8WXH6 277 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 HAVCR1Q96D42 359 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF385AQ96PM9 386 aaKnown RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 MARVELD1Q9BSK0 173 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 NAA11Q9BSU3 229 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 SRXN1Q9BYN0 137 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 FOXJ3Q9UPW0 622 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 CACNG2Q9Y698 323 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 LOC107986453A0A1B0GWG9 222 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 TTLL8A6PVC2 850 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 TLX3O43711 291 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 ACHEP22303 614 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 ART1P52961 327 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 PLA2G7Q13093 441 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF704Q6ZNC4 412 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 KRT74Q7RTS7 529 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 OR6F1Q8NGZ6 308 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 S100A16Q96FQ6 103 aaKnown RBP16.4■□□□□ 0.22
HOXC11-201ENST00000243082 GLTPQ9NZD2 209 aa16.4■□□□□ 0.22
HOXC11-201ENST00000243082 HMX3A6NHT5 357 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 GJE1A6NN92 205 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.39■□□□□ 0.21
HOXC11-201ENST00000243082 F10P00742 488 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 CD2P06729 351 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 FSTP19883 344 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 ENPP1P22413 925 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 PTH2RP49190 550 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 SCAND1P57086 179 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 OC90Q02509 493 aaPredicted RBP16.39■□□□□ 0.21
HOXC11-201ENST00000243082 PLA1AQ53H76 456 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 MTFR2Q6P444 385 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 TOMM5Q8N4H5 51 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 OR9K2Q8NGE7 335 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 OR14L1PQ8NHC6 308 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 ADAMTS17Q8TE56 1095 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 OR2M2Q96R28 347 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 AUNIPQ9H7T9 357 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 TAS2R4Q9NYW5 299 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 NCKAP5O14513 1909 aa16.39■□□□□ 0.21
HOXC11-201ENST00000243082 PINLYPA6NC86 204 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 TNFSF15O95150 251 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 ITGA5P08648 1049 aa16.38■□□□□ 0.21
HOXC11-201ENST00000243082 PHYHD1Q5SRE7 291 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms