RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 M0R082 166 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 CASQ2O14958 399 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 CH25HO95992 272 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FAM157BP0CG42 384 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF35P13682 527 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FPR3P25089 353 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 GLRXP35754 106 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 GPR4P46093 362 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 OMPP47874 163 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 GIPRP48546 466 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 EVX1P49640 407 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FOXL1Q12952 345 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RAB39AQ14964 217 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ANKDD1AQ495B1 522 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 TMPRSS11FQ6ZWK6 438 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF417Q8TAU3 575 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 GTF3AQ92664 365 aaKnown RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF587Q96SQ5 575 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FEVQ99581 238 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 VCX3BQ9H321 246 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 C7orf69Q9H7B7 122 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 UNKLQ9H9P5 680 aaKnown RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 C20orf141Q9NUB4 165 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 B3GNT2Q9NY97 397 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 NKX1-2Q9UD57 310 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ORC6Q9Y5N6 252 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 CACNG2Q9Y698 323 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 CMYA5Q8N3K9 4069 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FZD7O75084 574 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 SERPINI2O75830 405 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RAB36O95755 333 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 HKR1P10072 659 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 HLA-DOBP13765 273 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RAD52P43351 418 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RAB1AP62820 205 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 LCN2P80188 198 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 POU3F1Q03052 451 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 GLO1Q04760 184 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 COX10Q12887 443 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 TSPAN31Q12999 210 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF770Q6IQ21 691 aaPredicted RBP11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RPL13AP3Q6NVV1 102 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZBTB49Q6ZSB9 765 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 NANOGNBQ7Z5D8 188 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ZER1Q7Z7L7 766 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 OAFQ86UD1 273 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 WDFY1Q8IWB7 410 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 HS3ST5Q8IZT8 346 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 TEX29Q8N6K0 151 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 OR5J2Q8NH18 312 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 LIPHQ8WWY8 451 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 RASSF4Q9H2L5 321 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 ENOPH1Q9UHY7 261 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 POFUT2Q9Y2G5 429 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 UNC119BA6NIH7 251 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 HPRP00739 348 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 GASTP01350 101 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 CCL2P13500 99 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 FUT1P19526 365 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 MAKP20794 623 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 PRKACGP22612 351 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 FPR2P25090 351 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 GRPRP30550 384 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 GSSP48637 474 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 RPS23P62266 143 aaKnown RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 HNRNPA0Q13151 305 aaKnown RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 OGFRL1Q5TC84 451 aaPredicted RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 RBMS3Q6XE24 437 aaKnown RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 ADPRHL1Q8NDY3 354 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 RAB39BQ96DA2 213 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 MOGAT1Q96PD6 335 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 KRT84Q9NSB2 600 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 MED29Q9NX70 200 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 MRPL39Q9NYK5 338 aaKnown RBP11.75□□□□□ -0.53
DDX39A-201ENST00000242776 USE1Q9NZ43 259 aa11.75□□□□□ -0.53
DDX39A-201ENST00000242776 ISPDA4D126 451 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 LRRN3E7EW58 273 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 EI24O14681 340 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 OR6A2O95222 327 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 PEX2P28328 305 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 ALDH3A2P51648 485 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 RAD23AP54725 363 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 PMS2P3Q13401 168 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 CAMK2DQ13557 499 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 RFX4Q33E94 735 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 ZBED5Q49AG3 693 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 KDM4DQ6B0I6 523 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 RGS7BPQ6MZT1 257 aaPredicted RBP11.74□□□□□ -0.53
DDX39A-201ENST00000242776 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 CD300LDQ6UXZ3 194 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 RASSF6Q6ZTQ3 369 aa11.74□□□□□ -0.53
DDX39A-201ENST00000242776 USP51Q70EK9 711 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms