RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 JAGN1Q8N5M9 183 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ARIH2OSQ8N7S6 290 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 MINDY2Q8NBR6 621 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 MDS2Q8NDY4 140 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 OR8S1Q8NH09 359 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 RFT1Q96AA3 541 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 GNRHR2Q96P88 292 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TIMP4Q99727 224 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 LDAHQ9H6V9 325 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 NUDT15Q9NV35 164 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 FKBP7Q9Y680 259 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 LOC100509620A0A075B734 347 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 APEHP13798 732 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 CTLA4P16410 223 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 SRMP19623 302 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ENDOUP21128 410 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 PITPNBP48739 271 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 DNASE1L1P49184 302 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 P2RX1P51575 399 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TAS2R43P59537 309 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 IGLV3-21P80748 117 aaPredicted RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 POU4F2Q12837 409 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 FOXF1Q12946 379 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 FHL1Q13642 323 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 FAM69AQ5T7M9 428 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 AGAP6Q5VW22 663 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 HBMQ6B0K9 141 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 CMIPQ8IY22 773 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 GDPD1Q8N9F7 314 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 IL17RDQ8NFM7 739 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 MRPL48Q96GC5 212 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 LAT2Q9GZY6 243 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 COMMD4Q9H0A8 199 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 AUNIPQ9H7T9 357 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TEX15Q9BXT5 2789 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TRAV36DV7A0A075B6V5 113 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 CYSRT1A8MQ03 144 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 INMT-MINDY4F8WBC2 141 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 PRRG2O14669 202 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TRAPPC6AO75865 159 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TOXO94900 526 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 GIFP27352 417 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ETV6P41212 452 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 MRPL28Q13084 256 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TAF13Q15543 124 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 C3AR1Q16581 482 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 RAET1LQ5VY80 246 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF544Q6NX49 715 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 OPN5Q6U736 354 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 MRGPRGQ86SM5 289 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 TIGD4Q8IY51 512 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF485Q8NCK3 441 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 OR10H5Q8NGA6 315 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 SLC22A8Q8TCC7 542 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 CHIAQ9BZP6 476 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 RNF121Q9H920 327 aa7.72□□□□□ -1.17
VPS4B-201ENST00000238497 PAQR5Q9NXK6 330 aaPredicted RBP7.72□□□□□ -1.17
VPS4B-201ENST00000238497 A0A1B0GUH1 482 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 ZNF879B4DU55 563 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 PRSS44E7EML9 344 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 NPIPA2E9PIF3 369 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 NPIPA3F8WFD2 350 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 ACOT7O00154 380 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 PLPP2O43688 288 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 SERPINA3P01011 423 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 CDAP32320 146 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 POLR2HP52434 150 aaKnown RBP7.71□□□□□ -1.17
VPS4B-201ENST00000238497 BIDP55957 195 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 PPIAP62937 165 aaKnown RBP7.71□□□□□ -1.17
VPS4B-201ENST00000238497 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.17
VPS4B-201ENST00000238497 NTRK2Q16620 822 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 EEF1A1P5Q5VTE0 462 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 OR10K2Q6IF99 312 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 NCCRP1Q6ZVX7 275 aaPredicted RBP7.71□□□□□ -1.17
VPS4B-201ENST00000238497 SMIM19Q96E16 107 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 PSMG3-AS1Q96PY0 264 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 LIN7BQ9HAP6 207 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 ICAM5Q9UMF0 924 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 EMC9Q9Y3B6 208 aa7.71□□□□□ -1.17
VPS4B-201ENST00000238497 A8MVM7 634 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 B4DXG7 233 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 ALG1L2C9J202 215 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 NME2P1O60361 137 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 NME2P22392 152 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 SLC6A8P48029 635 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 MTNR1BP49286 362 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 PRSS12P56730 875 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 SPOCK1Q08629 439 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.71□□□□□ -1.18
VPS4B-201ENST00000238497 RNFT1Q5M7Z0 435 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 RPL22L1Q6P5R6 122 aaKnown RBP7.71□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM234Q8WY98 164 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 FAM46BQ96A09 425 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 PGLYRP3Q96LB9 341 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 KLHL15Q96M94 604 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 SPACA5Q96QH8 159 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF426Q9BUY5 554 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 SDHAF3Q9NRP4 125 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms