RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CD2P06729 351 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 HPGDP15428 266 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 CBX5P45973 191 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 MDGA2Q7Z553 956 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 ZNF761Q86XN6 746 aaPredicted RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 C12orf57Q99622 126 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 PRTFDC1Q9NRG1 225 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 MRPL22Q9NWU5 206 aaKnown RBP13.95□□□□□ -0.18
DDX55-201ENST00000238146 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
DDX55-201ENST00000238146 CHD9Q3L8U1 2897 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 WIPF3A6NGB9 483 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 C11orf98E9PRG8 122 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 K7EQS6 105 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 SPARCP09486 303 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 PVALBP20472 110 aaPredicted RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 MAOAP21397 527 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 SKP1P63208 163 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ADAM8P78325 824 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 IL13RA1P78552 427 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 SRSF3P84103 164 aaKnown RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 ROM1Q03395 351 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 CCINQ13939 588 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 MEF2DQ14814 521 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 CDNFQ49AH0 187 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 SLC18B1Q6NT16 456 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 TMEM71Q6P5X7 295 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 GTPBP8Q8N3Z3 284 aaPredicted RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 PRRT1Q99946 306 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ZNF629Q9UEG4 869 aaPredicted RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 ATPIF1Q9UII2 106 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 MKL2Q9ULH7 1088 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 A0A0A6YYH2 397 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 A6NJ64 397 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 OR6C76A6NM76 312 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 XKRYO14609 159 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ZNF264O43296 627 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ST6GAL1P15907 406 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 FSTP19883 344 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 RAB13P51153 203 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 DCDP81605 110 aaKnown RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 SPOCK1Q08629 439 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 RNASE10Q5GAN6 216 aaKnown RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 CATSPERDQ86XM0 798 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 JAGN1Q8N5M9 183 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 ACBD4Q8NC06 268 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 C8orf44Q96CB5 159 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 PIK3IP1Q96FE7 263 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 USB1Q9BQ65 265 aaKnown RBP13.94□□□□□ -0.18
DDX55-201ENST00000238146 NUDT9Q9BW91 350 aa13.94□□□□□ -0.18
DDX55-201ENST00000238146 RORAP35398 523 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 OR7A5Q15622 319 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 MICBQ29980 383 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 C10orf91Q5T1B1 145 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 DHRS7BQ6IAN0 325 aaPredicted RBP13.93□□□□□ -0.18
DDX55-201ENST00000238146 ZNF563Q8TA94 476 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 PAQR8Q8TEZ7 354 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 PHB2Q99623 299 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 KXD1Q9BQD3 176 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 TLNRD1Q9H1K6 362 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 COA4Q9NYJ1 87 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 EEF1E1-BLOC1S5C9J1V9 151 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 F8W036 122 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 ZNF208O43345 1280 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 PLGP00747 810 aaPredicted RBP13.93□□□□□ -0.18
DDX55-201ENST00000238146 CLPSP04118 112 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 PGAM2P15259 253 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 PPICP45877 212 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 BLOC1S1P78537 153 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 ZNF528Q3MIS6 628 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 GVQW1Q8N7I0 195 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 CASTOR1Q8WTX7 329 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 AQP3Q92482 292 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 CRISPLD2Q9H0B8 497 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 IFT22Q9H7X7 185 aa13.93□□□□□ -0.18
DDX55-201ENST00000238146 MRPS33Q9Y291 106 aaKnown RBP13.93□□□□□ -0.18
DDX55-201ENST00000238146 CARHSP1Q9Y2V2 147 aaKnown RBP13.93□□□□□ -0.18
DDX55-201ENST00000238146 C2orf16Q68DN1 1984 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 PRSS37A4D1T9 235 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 LINC01553A4QN01 128 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 F8VVB4 439 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 F8VWA3 439 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 GMFGO60234 142 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 SLC16A7O60669 478 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 OR6A2O95222 327 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 CD79AP11912 226 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 RIDAP52758 137 aaKnown RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 INSM1Q01101 510 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 PLEKHN1Q494U1 663 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 SLC22A6Q4U2R8 563 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 KCTD9Q7L273 389 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 NUP54Q7Z3B4 507 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 FJX1Q86VR8 437 aa13.92□□□□□ -0.18
DDX55-201ENST00000238146 FAM160A2Q8N612 972 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 LILRB1Q8NHL6 650 aaPredicted RBP13.92□□□□□ -0.18
DDX55-201ENST00000238146 STOML3Q8TAV4 291 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms