RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 FCGR2AP12318 317 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 C9orf135Q5VTT2 229 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 C9orf106Q8NAJ2 232 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 CPT1CQ8TCG5 803 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 RNF133Q8WVZ7 376 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 APH1AQ96BI3 265 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 TSC22D3Q99576 134 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 SH3GL3Q99963 347 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 DCSTAMPQ9H295 470 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 C1orf198Q9H425 327 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 B3GAT2Q9NPZ5 323 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 FRRS1LQ9P0K9 344 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 PRSS50Q9UI38 385 aa16.36■□□□□ 0.21
SNX17-201ENST00000233575 DOCK7Q96N67 2140 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 GABRPO00591 440 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 MRPS34P82930 218 aaKnown RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 MFGE8Q08431 387 aaPredicted RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 CCDC58Q4VC31 144 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 ALDH16A1Q8IZ83 802 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 PRSS35Q8N3Z0 413 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 RPS4Y2Q8TD47 263 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 PPP1R14AQ96A00 147 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 FOXB1Q99853 325 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 LINC00470Q9BZP3 86 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 PNRC2Q9NPJ4 139 aaKnown RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 ZFPL1O95159 310 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 OPRL1P41146 370 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 GUCA1AP43080 201 aaPredicted RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 SERPINB10P48595 397 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 TGM4P49221 684 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 TDGF1P3P51864 188 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 LSM6P62312 80 aaKnown RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 OR2AJ1Q8NGZ0 328 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 DYNC2LI1Q8TCX1 351 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 FBXO17Q96EF6 278 aa16.35■□□□□ 0.21
SNX17-201ENST00000233575 GMPPAQ96IJ6 420 aaPredicted RBP16.35■□□□□ 0.21
SNX17-201ENST00000233575 TRDV1A0A1B0GX56 115 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 HLA-DPB1P04440 258 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 TPOP07202 933 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 RIDAP52758 137 aaKnown RBP16.34■□□□□ 0.21
SNX17-201ENST00000233575 RPS11P62280 158 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX17-201ENST00000233575 ALKBH1Q13686 389 aaKnown RBP16.34■□□□□ 0.21
SNX17-201ENST00000233575 ODF4Q2M2E3 257 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 GDPGP1Q6ZNW5 385 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 ZNF100Q8IYN0 542 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 OR2G2Q8NGZ5 317 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 SNRNP40Q96DI7 357 aaKnown RBP16.34■□□□□ 0.21
SNX17-201ENST00000233575 PPIL3Q9H2H8 161 aaKnown RBP16.34■□□□□ 0.21
SNX17-201ENST00000233575 TUBD1Q9UJT1 453 aa16.34■□□□□ 0.21
SNX17-201ENST00000233575 AHRRA9YTQ3 701 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 SS18L1O75177 396 aaPredicted RBP16.33■□□□□ 0.21
SNX17-201ENST00000233575 PATE4P0C8F1 98 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.21
SNX17-201ENST00000233575 KIR3DL2P43630 455 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 FAPQ12884 760 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 WDR38Q5JTN6 314 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 FAM27D1Q5T7N8 215 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 FAM27BQ5VT28 67 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 RTL6Q6ICC9 239 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 KLHL24Q6TFL4 600 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 SEM1Q6ZVN7 128 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 UBE2J2Q8N2K1 259 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 RPRMLQ8N4K4 120 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 ABHD4Q8TB40 342 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 RGP1Q92546 391 aaPredicted RBP16.33■□□□□ 0.21
SNX17-201ENST00000233575 SIAEQ9HAT2 523 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 SLC22A13Q9Y226 551 aa16.33■□□□□ 0.21
SNX17-201ENST00000233575 NBEAQ8NFP9 2946 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 ITPR1Q14643 2758 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 SHISA3A0PJX4 238 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 H3BSH0 61 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 SRSF10O75494 262 aaKnown RBP16.33■□□□□ 0.2
SNX17-201ENST00000233575 RGS9O75916 674 aaPredicted RBP16.33■□□□□ 0.2
SNX17-201ENST00000233575 H2BFMP0C1H6 154 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 MAGEB1P43366 347 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 GUSBP1Q15486 140 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 KRTCAP3Q53RY4 240 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 C3P1Q6ZMU1 363 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 USP43Q70EL4 1123 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 CD163Q86VB7 1156 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 RDH10Q8IZV5 341 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 WNT2BQ93097 391 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 PRORYQ9H606 182 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 GP6Q9HCN6 339 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 UPB1Q9UBR1 384 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 GTF2A1LQ9UNN4 478 aa16.33■□□□□ 0.2
SNX17-201ENST00000233575 DOK2O60496 412 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 SC5DO75845 299 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 NPR2P20594 1047 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 FGF9P31371 208 aaPredicted RBP16.32■□□□□ 0.2
SNX17-201ENST00000233575 UGT2B10P36537 528 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 FOXF2Q12947 444 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 EGFL6Q8IUX8 553 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 SLC22A24Q8N4F4 322 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 TEX19Q8NA77 164 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 KBTBD8Q8NFY9 601 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 FGFBP3Q8TAT2 258 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 C4orf45Q96LM5 186 aa16.32■□□□□ 0.2
SNX17-201ENST00000233575 ASF1BQ9NVP2 202 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms