RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
NFKB1-201ENST00000226574 SERTM1A2A2V5 107 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 TP53I11O14683 189 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 LPLP06858 475 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 MTCP1P56278 107 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR2B8PP59922 312 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 DLX2Q07687 328 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 CD300LDQ6UXZ3 194 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 BAHD1Q8TBE0 780 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 ADAMTS18Q8TE60 1221 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 PHYHIPQ92561 330 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 C14orf79Q96F83 325 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 LYRM4Q9HD34 91 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 FAM60AQ9NP50 221 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 A0A0B4J2E0 115 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 A0A1B0GX12 115 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 KCNAB3O43448 404 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 MPZL1O95297 269 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 CBX7O95931 251 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 SEMG1P04279 462 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 EN2P19622 333 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 PRSS12P56730 875 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 C21orf58P58505 322 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 FMODQ06828 376 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR2L13Q8N349 312 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 PIGCQ92535 297 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 FBXW5Q969U6 566 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF75AQ96N20 296 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 RPS18P62269 152 aaKnown RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 LPAL2Q16609 132 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 TUSC1Q2TAM9 212 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 SLC35D3Q5M8T2 416 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 WDR88Q6ZMY6 472 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 SCGB1C1Q8TD33 95 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR2A5Q96R48 311 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 ABHD6Q9BV23 337 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 FLRT3Q9NZU0 649 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 A0A087WV62 115 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 A0A1W2PPV9 198 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 A6NIZ1 184 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 IGF2P01344 180 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 IGHV3-9P01782 118 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 AGFG1P52594 562 aaKnown RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 RAP1BP61224 184 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 RAP1AP62834 184 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 OR10Z1Q8NGY1 313 aa12.47□□□□□ -0.41
NFKB1-201ENST00000226574 TRAF4Q9BUZ4 470 aaPredicted RBP12.47□□□□□ -0.41
NFKB1-201ENST00000226574 IGHV3-64DA0A0J9YX35 117 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 MCRIP1C9JLW8 97 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 GREM1O60565 184 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CD38P28907 300 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CLDN17P56750 224 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 ACSM1Q08AH1 577 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 WDR38Q5JTN6 314 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 NICN1Q9BSH3 213 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CA10Q9NS85 328 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 RARRES3Q9UL19 164 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 ARID2Q68CP9 1835 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 C4orf47A7E2U8 309 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 STMND1H3BQB6 276 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CELA2BP08218 269 aaPredicted RBP12.46□□□□□ -0.41
NFKB1-201ENST00000226574 OR1D5P58170 312 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 PLA2G7Q13093 441 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CCDC54Q8NEL0 328 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 C8orf44Q96CB5 159 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF578Q96N58 590 aaPredicted RBP12.46□□□□□ -0.41
NFKB1-201ENST00000226574 PFDN5Q99471 154 aa12.46□□□□□ -0.41
NFKB1-201ENST00000226574 CMSS1Q9BQ75 279 aaKnown RBP12.46□□□□□ -0.41
NFKB1-201ENST00000226574 EXOGQ9Y2C4 368 aaKnown RBP12.46□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF354AO60765 605 aaPredicted RBP12.46□□□□□ -0.42
NFKB1-201ENST00000226574 DIRAS3O95661 229 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 CSNK1A1P48729 337 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 SLC22A24Q8N4F4 322 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 OR5L2Q8NGL0 311 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 ZPLD1Q8TCW7 415 aa12.46□□□□□ -0.42
NFKB1-201ENST00000226574 TCTN2Q96GX1 697 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms