RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 OR1C1Q15619 314 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 ISYNA1Q9NPH2 558 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 MYH4Q9Y623 1939 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 ARID1BQ8NFD5 2236 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-201ENST00000219334 IGHV3-64DA0A0J9YX35 117 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 C7orf72A4D263 438 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 AADACP22760 399 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 MAVSQ7Z434 540 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 SEC22AQ96IW7 307 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 LRFN5Q96NI6 719 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 BIN3Q9NQY0 253 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 PHIPQ8WWQ0 1821 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 MYO7AQ13402 2215 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 TRBV5-4A0A0C4DH59 114 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 TBPP20226 339 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 RPL18Q07020 188 aaKnown RBP17.26■□□□□ 0.35
SMPD3-201ENST00000219334 NCCRP1Q6ZVX7 275 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-201ENST00000219334 NAA40Q86UY6 237 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 FBXL6Q8N531 539 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 OR52H1Q8NGJ2 320 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 MYEOVQ96EZ4 313 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 CXorf51AA0A1B0GTR3 108 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 PRPH2P23942 346 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 FABP6P51161 128 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 AARDQ4LEZ3 155 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 PRAMEF5Q5TYX0 476 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 PRAMEF6Q5VXH4 476 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 TMPRSS7Q7RTY8 843 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 MDGA2Q7Z553 956 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 SLCO4A1Q96BD0 722 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 C3orf49Q96BT1 292 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 OR5M11Q96RB7 305 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 PDCD1LG2Q9BQ51 273 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF436Q9C0F3 470 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-201ENST00000219334 YBX2Q9Y2T7 364 aaKnown RBP17.26■□□□□ 0.35
SMPD3-201ENST00000219334 M0QYG6 137 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 SUMO3P55854 103 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 CORO2AQ92828 525 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 ITPKCQ96DU7 683 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 GINS3Q9BRX5 216 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 MEIKINA0A087WXM9 373 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 FCMRO60667 390 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 INSM1Q01101 510 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 IL11RAQ14626 422 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 SHBQ15464 509 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 IAH1Q2TAA2 248 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 CORO6Q6QEF8 472 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 OR2L13Q8N349 312 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 OR1M1Q8NGA1 313 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 C19orf43Q9BQ61 176 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 TRGV5A0A0B4J1U4 118 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF705FA8MVS1 300 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 LINC01387J3KSC0 135 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF705DP0CH99 300 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF705BP0CI00 300 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 APEHP13798 732 aaKnown RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 SSX2Q16385 188 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 TRILQ7L0X0 811 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 OR2AE1Q8NHA4 323 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 GPR78Q96P69 363 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 FAM173AQ9BQD7 235 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 IGHV3-15A0A0B4J1V0 119 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 HIST1H1CP16403 213 aaKnown RBP17.25■□□□□ 0.35
SMPD3-201ENST00000219334 GNB1P62873 340 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 GUSBP11Q6P575 273 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 S1PR3Q99500 378 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 JAM3Q9BX67 310 aa17.25■□□□□ 0.35
SMPD3-201ENST00000219334 UPK1AO00322 258 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SPI1P17947 270 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF385BQ569K4 471 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ZNF626Q68DY1 528 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 LHFPL2Q6ZUX7 228 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 LAX1Q8IWV1 398 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 FAM109AQ8N4B1 249 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 OR51H1Q8NH63 302 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SEH1LQ96EE3 360 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ATF6BQ99941 703 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 METTL17Q9H7H0 456 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 CMC2Q9NRP2 79 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 MED29Q9NX70 200 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SIRPB1O00241 398 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 NRASP01111 189 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 DSCR4P56555 118 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 HTR4Q13639 388 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 PLXDC2Q6UX71 529 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 GCNT2Q8N0V5 402 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 OLIG1Q8TAK6 271 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 SULT1B1O43704 296 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 PRKNO60260 465 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 DLEU7Q6UYE1 221 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 DVL3Q92997 716 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 MBOAT4Q96T53 435 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ACOXLQ9NUZ1 547 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ATP1B1P05026 303 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 KDM4DQ6B0I6 523 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 RGS7BPQ6MZT1 257 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 IL34Q6ZMJ4 242 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 ROBO4Q8WZ75 1007 aa17.24■□□□□ 0.35
SMPD3-201ENST00000219334 BSCL2Q96G97 398 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-201ENST00000219334 OR2A14Q96R47 310 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms