RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 OR1J2Q8NGS2 313 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 SLC38A3Q99624 504 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 CMKLR1Q99788 373 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 NUDT9Q9BW91 350 aa15.51■□□□□ 0.07
USB1-201ENST00000219281 VSX1Q9NZR4 365 aaPredicted RBP15.51■□□□□ 0.07
USB1-201ENST00000219281 D6RAR5 112 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 DDAH2O95865 285 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 IGKV3-11P04433 115 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 BLKP51451 505 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 PMPCAQ10713 525 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 SQSTM1Q13501 440 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 MOGAT2Q3SYC2 334 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 SCGB2B2Q4G0G5 96 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 C17orf107Q6ZR85 190 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 BEST3Q8N1M1 668 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 SLC25A21Q9BQT8 299 aaPredicted RBP15.5■□□□□ 0.07
USB1-201ENST00000219281 TBL1XR1Q9BZK7 514 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 TXNIPQ9H3M7 391 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 UBE2ZQ9H832 354 aaPredicted RBP15.5■□□□□ 0.07
USB1-201ENST00000219281 TMED7-TICAM2A0A0A6YYA0 188 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 NUPL2O15504 423 aaKnown RBP15.5■□□□□ 0.07
USB1-201ENST00000219281 MT-ATP6P00846 226 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 CSN2P05814 226 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 ZNF28P17035 718 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 PGCP20142 388 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 ACHEP22303 614 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 DNASE1L1P49184 302 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 ATPAF1Q5TC12 328 aaPredicted RBP15.5■□□□□ 0.07
USB1-201ENST00000219281 TFAP2EQ6VUC0 442 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 JAGN1Q8N5M9 183 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 OR13C3Q8NGS6 347 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 ASB13Q8WXK3 278 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 PDE7BQ9NP56 450 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 COA3Q9Y2R0 106 aaPredicted RBP15.5■□□□□ 0.07
USB1-201ENST00000219281 TMED7Q9Y3B3 224 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 EMC9Q9Y3B6 208 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 TMEM131Q92545 1883 aa15.5■□□□□ 0.07
USB1-201ENST00000219281 ZNF736B4DX44 427 aaPredicted RBP15.49■□□□□ 0.07
USB1-201ENST00000219281 CYB5AP00167 134 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 ZNF735P0CB33 412 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 ADGRE4PQ86SQ3 457 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 C9orf40Q8IXQ3 194 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 BPIFB2Q8N4F0 458 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 OR11A1Q9GZK7 315 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 SCPEP1Q9HB40 452 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 KLK13Q9UKR3 277 aa15.49■□□□□ 0.07
USB1-201ENST00000219281 A0A1W2PR77 199 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 LMX1BO60663 402 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 ZNF217O75362 1048 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 DXOO77932 396 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 LIPCP11150 499 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 CTRB1P17538 263 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 FSTP19883 344 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 PLCXD2Q0VAA5 305 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 CLVS2Q5SYC1 327 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 C1orf140Q5VVS0 124 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 HLA-DQA1Q5Y7H0 255 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 CTRB2Q6GPI1 263 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 KDM8Q8N371 416 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 PXT1Q8NFP0 134 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 OR4S1Q8NGB4 309 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 OR52N5Q8NH56 324 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 ST8SIA2Q92186 375 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 MRPS24Q96EL2 167 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 ZNF587Q96SQ5 575 aaPredicted RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 SLC6A7Q99884 636 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 PRO3102Q9H379 93 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 CUTCQ9NTM9 273 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 FITM1A5D6W6 292 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 TMEM235A6NFC5 223 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 ALG1L2C9J202 215 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 EIF4E2O60573 245 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 TSPAN2O60636 221 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 MGMTP16455 207 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 NAGAP17050 411 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 POLR2HP52434 150 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 DHRS2Q13268 280 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 ZNF273Q14593 569 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 EBPQ15125 230 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 FAM74A1Q5RGS3 127 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 LRFN4Q6PJG9 635 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 CFAP77Q6ZQR2 320 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 EIF4E3Q8N5X7 224 aaKnown RBP15.48■□□□□ 0.07
USB1-201ENST00000219281 FAM174AQ8TBP5 190 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 NKD1Q969G9 470 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 B3GNT4Q9C0J1 378 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 GLS2Q9UI32 602 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 MMACHCQ9Y4U1 282 aa15.48■□□□□ 0.07
USB1-201ENST00000219281 ARPC4-TTLL3A0A0A6YYG9 625 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 OR5H14A6NHG9 310 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 METTL12A8MUP2 240 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 PLPP3O14495 311 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 CCSO14618 274 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 NPIPB7O75200 414 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 UBBP0CG47 229 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 UBCP0CG48 685 aaKnown RBP15.47■□□□□ 0.07
USB1-201ENST00000219281 HLA-DOBP13765 273 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 CD34P28906 385 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 AGTR1P30556 359 aa15.47■□□□□ 0.07
USB1-201ENST00000219281 FASLGP48023 281 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms