RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ASCC3Q8N3C0 2202 aaKnown RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 CD300LBA8K4G0 201 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 PAPLNO95428 1278 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 ZNF674Q2M3X9 581 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 GPR78Q96P69 363 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 TSNAXQ99598 290 aaKnown RBP12.45□□□□□ -0.42
SIX4-201ENST00000216513 CENPOQ9BU64 300 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 DDA1Q9BW61 102 aa12.45□□□□□ -0.42
SIX4-201ENST00000216513 SYT5O00445 386 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 LYRM1O43325 122 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 RAB6AP20340 208 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 AADACL3Q5VUY0 350 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 PLAG1Q6DJT9 500 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 COMMD7Q86VX2 200 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SIMC1Q8NDZ2 872 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 DEDD2Q8WXF8 326 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SEC22AQ96IW7 307 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 ZNF681Q96N22 645 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 ACOT13Q9NPJ3 140 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SLC22A23A1A5C7 686 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 CDAP32320 146 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 THAP7Q9BT49 309 aaPredicted RBP12.44□□□□□ -0.42
SIX4-201ENST00000216513 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 CHODLQ9H9P2 273 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 PCOLCE2Q9UKZ9 415 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SHROOM3Q8TF72 1996 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 TRIM64CA6NLI5 447 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 TFP02787 698 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 TK1P04183 234 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SHC1P29353 583 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 HAVCR2Q8TDQ0 301 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 CHPT1Q8WUD6 406 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
SIX4-201ENST00000216513 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
SIX4-201ENST00000216513 BHLHE40O14503 412 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 SP1P08047 785 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 PLA2G7Q13093 441 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 DNASE2BQ8WZ79 361 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 FN3KRPQ9HA64 309 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 OR52A1Q9UKL2 312 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
SIX4-201ENST00000216513 PRKYO43930 277 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 LY6DQ14210 128 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 PLK3Q9H4B4 646 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 GORASP2Q9H8Y8 452 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 FOXJ2Q9P0K8 574 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
SIX4-201ENST00000216513 NDUFB3O43676 98 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 FGL1Q08830 312 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ZNF691Q5VV52 312 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 GIMAP5Q96F15 307 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 RASL10BQ96S79 203 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 FOXB1Q99853 325 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 PARP12Q9H0J9 701 aaKnown RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 ZNF286AQ9HBT8 521 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 PRDM7Q9NQW5 492 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 TREM2Q9NZC2 230 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 M0R135 149 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 CREBL2O60519 120 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 SLC22A5O76082 557 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 RGS11O94810 467 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 OR8U9P0C7N5 309 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 RPL18Q07020 188 aaKnown RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 GALEQ14376 348 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ADPRMQ3LIE5 342 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 DNAJC22Q8N4W6 341 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 PLPP7Q8NBV4 271 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ZNF799Q96GE5 643 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 AMBRA1Q9C0C7 1298 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 LAP3P28838 519 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 BDKRB2P30411 391 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 DBPQ10586 325 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 GSG1LQ6UXU4 331 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 SPACA5Q96QH8 159 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 TRIP11Q15643 1979 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 A0A1W2PRD5 423 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 A0A1W2PRF3 423 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 A0A1W2PRM7 423 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 FPR3P25089 353 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 GALNSP34059 522 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 CAMLGP49069 296 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 LUMP51884 338 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 SUMO3P55854 103 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 LRRC10Q5BKY1 277 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 OR52W1Q6IF63 320 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 PAQR6Q6TCH4 344 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ELMOD3Q96FG2 381 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ANKRD60Q9BZ19 345 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 TAAR3PQ9P1P4 343 aa12.43□□□□□ -0.42
SIX4-201ENST00000216513 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
SIX4-201ENST00000216513 HMX2A2RU54 273 aa12.42□□□□□ -0.42
SIX4-201ENST00000216513 GABRPO00591 440 aa12.42□□□□□ -0.42
SIX4-201ENST00000216513 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms