RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 OPN1LWP04000 364 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 NMUP48645 174 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TESK1Q15569 626 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PACRGLQ8N7B6 248 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZNF383Q8NA42 475 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ARRDC2Q8TBH0 407 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SLC25A40Q8TBP6 338 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZG16BQ96DA0 208 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GABRG3Q99928 467 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SARGQ9BW04 601 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C11orf68Q9H3H3 251 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LPAR3Q9UBY5 353 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TRAV36DV7A0A075B6V5 113 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 WNT9BO14905 357 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZNF749O43361 778 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 F13BP05160 661 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 FOLR1P15328 257 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CEACAM8P31997 349 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 RAG2P55895 527 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SMAD2Q15796 467 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 NDUFAF5Q5TEU4 345 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CCDC144NLQ6NUI1 221 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PLBD1Q6P4A8 553 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TIPARPQ7Z3E1 657 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 CENPVQ7Z7K6 275 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 OR6V1Q8N148 313 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C1orf162Q8NEQ5 155 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 OR10P1Q8NGE3 313 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 RAB3CQ96E17 227 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PELI1Q96FA3 418 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GLRX2Q9NS18 164 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CST3P01034 146 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LMO2P25791 158 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ACSM1Q08AH1 577 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C22orf42Q6IC83 251 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TANGO2Q6ICL3 276 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 GPR32P1Q8NGA4 272 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 LINC01599Q8WXQ3 324 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 HSD17B8Q92506 261 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SELENOIQ9C0D9 397 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TRAV38-1A0A0B4J264 116 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PRSS44E7EML9 344 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ATP6V1G2-DDX39BF2Z307 99 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 NME2P1O60361 137 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 RFX2P48378 723 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 HMGA2P52926 109 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR1D5P58170 312 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ALYREFQ86V81 257 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 OR2A1Q8NGT9 310 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ELSPBP1Q96BH3 223 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 FAM208AQ9UK61 1670 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 GPR75O95800 540 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PRSS1P07477 247 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PAFAH1B3Q15102 231 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 MEPCEQ7L2J0 689 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 MFSD9Q8NBP5 474 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 OR11G2Q8NGC1 345 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ISG20Q96AZ6 181 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 IL17FQ96PD4 163 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C1QTNF2Q9BXJ5 285 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TMEM72A0PK05 275 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 KRBOX1C9JBD0 128 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 G3V3Y1 287 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ICMTO60725 284 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 EVI2BP34910 448 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 RPL35P42766 123 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LSM11P83369 360 aaKnown RBP eCLIP3.16□□□□□ -1.9
NEB-201ENST00000172853 JOSD1Q15040 202 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 PIANPQ8IYJ0 282 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 V9GYS6 101 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ALDOCP09972 364 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 PIPP12273 146 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 WNT5AP41221 380 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZNF385BQ569K4 471 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CRELD2Q6UXH1 353 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 OR5W2Q8NH69 310 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 MED30Q96HR3 178 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 KCNMB3Q9NPA1 279 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PTTG3PQ9NZH4 202 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 SLC23A1Q9UHI7 598 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 TMEM59LQ9UK28 342 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 CORINQ9Y5Q5 1042 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TMEM238LA0A1B0GVL6 79 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 A6NJY4 79 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 TOX4O94842 621 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 HIST1H1BP16401 226 aaKnown RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LOXL3P58215 753 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PJVKQ0ZLH3 352 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 AGERQ15109 404 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 ZNF648Q5T619 568 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.16□□□□□ -1.9
NEB-201ENST00000172853 PDZD3Q86UT5 571 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 C11orf54Q9H0W9 315 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 KCNK12Q9HB15 430 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 PPP1R2P9O14990 202 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 UNGP13051 313 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 BMP1P13497 986 aa3.16□□□□□ -1.9
NEB-201ENST00000172853 USF1P22415 310 aaPredicted RBP3.16□□□□□ -1.9
NEB-201ENST00000172853 BCL6P41182 706 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms