RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MOB3CQ70IA8 216 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 PRSS58Q8IYP2 241 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 KCNRGQ8N5I3 272 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 CHST4Q8NCG5 386 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 OR4D6Q8NGJ1 314 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 GPBAR1Q8TDU6 330 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 RNF128Q8TEB7 428 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.61□□□□□ -0.39
USH1C-201ENST00000005226 TSLPQ969D9 159 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 PELOQ9BRX2 385 aaKnown RBP12.61□□□□□ -0.39
USH1C-201ENST00000005226 ALX4Q9H161 411 aaPredicted RBP12.61□□□□□ -0.39
USH1C-201ENST00000005226 LRP12Q9Y561 859 aa12.61□□□□□ -0.39
USH1C-201ENST00000005226 NUP210LQ5VU65 1888 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 BGLAPP02818 100 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 DCNP07585 359 aaKnown RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 IL11P20809 199 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 ZNF440Q8IYI8 595 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 ADAD2Q8NCV1 583 aaKnown RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 PTPMT1Q8WUK0 201 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 NUDCD2Q8WVJ2 157 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 MRGPRFQ96AM1 343 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 PRMT8Q9NR22 394 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 ASF1BQ9NVP2 202 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 COMMD9Q9P000 198 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 UPB1Q9UBR1 384 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 COA3Q9Y2R0 106 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 A0A1B0GTI1 187 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 PRSS37A4D1T9 235 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 F5H0A9 414 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 TNFRSF10CO14798 259 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 SNAPC5O75971 98 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 GUSBP08236 651 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 VAMP1P23763 118 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 OR1D4P47884 311 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 DNASE1L1P49184 302 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 IGLV3-21P80748 117 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 PRAMEF17Q5VTA0 474 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 WDFY1Q8IWB7 410 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 CLRN3Q8NCR9 226 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 OR13C3Q8NGS6 347 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 C8orf44Q96CB5 159 aa12.6□□□□□ -0.39
USH1C-201ENST00000005226 GPN3Q9UHW5 284 aaPredicted RBP12.6□□□□□ -0.39
USH1C-201ENST00000005226 SDK1Q7Z5N4 2213 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 A0A0D9SG52 128 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 C13orf42A0A1B0GVH6 325 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 GP1BAP07359 652 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 IFI6P09912 130 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 AKR1C4P17516 323 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 BDKRB2P30411 391 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 SCAND1P57086 179 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
USH1C-201ENST00000005226 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 EMC4Q5J8M3 183 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 RNF144BQ7Z419 303 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 SLC25A21Q9BQT8 299 aaPredicted RBP12.59□□□□□ -0.39
USH1C-201ENST00000005226 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 PCDHB10Q9UN67 800 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 P2RY10O00398 339 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 CTSEP14091 401 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 SLC37A1P57057 533 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 FOXL2P58012 376 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 FMODQ06828 376 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 FJX1Q86VR8 437 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 ADAM19Q9H013 955 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 HPF1Q9NWY4 346 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
USH1C-201ENST00000005226 ATXN7L1Q9ULK2 861 aaPredicted RBP12.59□□□□□ -0.39
USH1C-201ENST00000005226 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 BCL2L11O43521 198 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 IL33O95760 270 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 CD8AP01732 235 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 AKT2P31751 481 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 RIDAP52758 137 aaKnown RBP12.58□□□□□ -0.4
USH1C-201ENST00000005226 ZP2Q05996 745 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
USH1C-201ENST00000005226 TMPPEQ6ZT21 453 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 CATSPERDQ86XM0 798 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 ZNF584Q8IVC4 421 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 TMEM231Q9H6L2 316 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 MBD2Q9UBB5 411 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 TPPPO94811 219 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 AGTR1P30556 359 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.4
USH1C-201ENST00000005226 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
USH1C-201ENST00000005226 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
USH1C-201ENST00000005226 TRAPPC6BQ86SZ2 158 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 ROBO4Q8WZ75 1007 aa12.58□□□□□ -0.4
USH1C-201ENST00000005226 ZC3H10Q96K80 434 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms