RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Kif13bA0A286YCV9 1847 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Zfp995E9Q6M3 437 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 NfkbieO54910 364 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Klk1b16P04071 261 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Hnf1aP22361 628 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rack1P68040 317 aaKnown RBP9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Crebl2Q32M00 123 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 UevldQ3U1V6 471 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Glt8d1Q6NSU3 371 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ubtd2Q6PGH0 234 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tnfsfm13Q8BXS2 410 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Fam234bQ8BYI8 624 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 FkrpQ8CG64 494 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ubac2Q8R1K1 345 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mrgpra7Q91ZC5 305 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 CenpmQ9CQA0 180 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ap1s2Q9DB50 160 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Igkv17-121A0A0G2JFA8 117 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tmem229aB9EJI9 371 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Alkal1J3QPP8 127 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr224M9MMJ7 314 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tcstv3O70518 169 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 LifP09056 203 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 GipP48756 144 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 St6gal1Q64685 403 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Kansl1Q80TG1 1036 aaKnown RBP9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Actbl2Q8BFZ3 376 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Pi15Q8BS03 258 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Med17Q8VCD5 649 aaKnown RBP9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr734Q8VFT4 313 aa9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Dnmt3lQ9CWR8 421 aaKnown RBP9.08□□□□□ -0.96
Syne1-201ENSMUST00000041639 Trav6-7-dv9A0A075B639 125 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Lcn11A2BHR2 178 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm21818J3KMS6 170 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Phlda2O08969 144 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gpr50O88495 591 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 LplP11152 474 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Prkar2aP12367 401 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Apobec1P51908 229 aaKnown RBP9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Sim2Q61079 657 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 SpicQ6P3D7 242 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Cbr3Q8K354 277 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr583Q8VG25 319 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mettl21AQ9CQL0 218 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 DhdhQ9DBB8 333 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Htra4A2RT60 483 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Zfp735B1ARH2 734 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Yjefn3F6W8I0 251 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm43191F6YIH5 235 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr64F8VPZ8 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 HexbP20060 536 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 VegfbP49766 207 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 ApodP51910 189 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 SnrpgP62309 76 aaKnown RBP9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 March5Q3KNM2 278 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 CrhbpQ60571 322 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ugt8Q64676 541 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tmeff1Q6PFE7 372 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Prss54Q7M756 383 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr32Q7TQZ0 308 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1167Q7TR26 316 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Hapln3Q80WM5 359 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr1086Q8VFL9 310 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Etfrf1Q91V16 86 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Nxph3Q91VX5 252 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Glyr1Q922P9 546 aaKnown RBP9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Ntn4Q9JI33 628 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm14418A2ARR6 358 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm14322A2AW66 358 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm14295A2BG91 834 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r137D3YTY1 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r143E9PUW9 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r157E9Q069 297 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r139E9Q8L6 297 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rdh16f1E9Q9P8 317 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r112G3UY48 297 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r135K9J7G0 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r125L7N227 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r116L7N2A6 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Rab5cP35278 216 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Tnfsf10P50592 291 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Gm2016Q3TQZ4 144 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 TfptQ3U1J1 259 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Adam9Q61072 845 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Slc5a7Q8BGY9 580 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mettl2Q8BMK1 389 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Adipor2Q8BQS5 386 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Olfr60Q8VGL4 311 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 1700029P11RikQ9CQ68 150 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Vmn1r100Q9EPS5 307 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Syt9Q9R0N9 491 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Aloxe3Q9WV07 711 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 RfxankQ9Z205 269 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Spta1P08032 2415 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Pgbd5D3YZI9 523 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 AF067061O70616 171 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Zfand5O88878 213 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Hoxa9P09631 271 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Hoxd4P10628 250 aa9.07□□□□□ -0.96
Syne1-201ENSMUST00000041639 Mcpt2P15119 244 aa9.07□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms