RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 APODP05090 189 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 IGHV4-34P06331 123 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 ZNF735P0CB33 412 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 ZNF853P0CG23 659 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 PNMTP11086 282 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 F8A1P23610 371 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 GABRR1P24046 479 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 LAP3P28838 519 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 RPL4P36578 427 aaKnown RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 TDO2P48775 406 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 OTUD4Q01804 1114 aaKnown RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 ZNF45Q02386 682 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 MRPL28Q13084 256 aaKnown RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 ZNF154Q13106 437 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 FZD2Q14332 565 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 DPYSL2Q16555 572 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 GGTA1PQ4G0N0 100 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 KCTD21Q4G0X4 260 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 SFT2D3Q587I9 215 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 PHYHD1Q5SRE7 291 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 METTL11BQ5VVY1 283 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 KHDRBS2Q5VWX1 349 aaKnown RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 LIPNQ5VXI9 398 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 ZSCAN25Q6NSZ9 544 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 FAHD2BQ6P2I3 314 aaPredicted RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 SCYL2Q6P3W7 929 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 CYS1Q717R9 158 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 MOB3BQ86TA1 216 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 ACOT1Q86TX2 421 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 IFNEQ86WN2 208 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 CDR2LQ86X02 465 aaPredicted RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 SLC22A9Q8IVM8 553 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 MKXQ8IYA7 352 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 SLC38A6Q8IZM9 456 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 NECAB1Q8N987 351 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 OR4D5Q8NGN0 318 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 OR8J1Q8NGP2 316 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 SLC2A14Q8TDB8 520 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 RPL3LQ92901 407 aaKnown RBP2.05□□□□□ -2.08
ATM-230ENST00000640388 NEIL2Q969S2 332 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 RASD2Q96D21 266 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 HAVCR1Q96D42 359 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 PELI1Q96FA3 418 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 SDSLQ96GA7 329 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 FAHD2AQ96GK7 314 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 TMEM80Q96HE8 168 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 TBX15Q96SF7 602 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 NPAS2Q99743 824 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 SLC6A7Q99884 636 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 GABRG3Q99928 467 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 CITED1Q99966 193 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 EBF4Q9BQW3 602 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 DUSP16Q9BY84 665 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 PXMP2Q9NR77 195 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 CDH9Q9ULB4 789 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 TMED5Q9Y3A6 229 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 MYH6P13533 1939 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 PRR14LQ5THK1 2151 aa2.05□□□□□ -2.08
ATM-230ENST00000640388 GSTTP1A0A1W2PQM5 241 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 FAM47DPA6NHR8 397 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 OR6C65A6NJZ3 312 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 FAM74A7A6NL05 159 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 TMEM110-MUSTN1A8MSY1 372 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 D6RAR5 112 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 E9PBE3 544 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 NBR2O15453 112 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 PRKAB2O43741 272 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CIB2O75838 187 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 MMP23AO75900 390 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 TSPAN12O95859 305 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 IGKV3-11P04433 115 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 HPNP05981 417 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CD55P08174 381 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 HSMCR30P0CW71 290 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 POU2F1P14859 743 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 VDAC1P21796 283 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ATP5A1P25705 553 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 GABRR2P28476 465 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ADORA2BP29275 332 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 PEX19P40855 299 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CA7P43166 264 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 MAGEA5P43359 124 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 P2RY1P47900 373 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 RPL29P47914 159 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 HNRNPA3P51991 378 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 EFNB2P52799 333 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 RND3P61587 244 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ACTG1P63261 375 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 MRPS11P82912 194 aaKnown RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 EWSR1Q01844 656 aaKnown RBP eCLIP2.04□□□□□ -2.08
ATM-230ENST00000640388 OC90Q02509 493 aaPredicted RBP2.04□□□□□ -2.08
ATM-230ENST00000640388 RGS1Q08116 209 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 RAB40BQ12829 278 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CUL2Q13617 745 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CHI3L2Q15782 390 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 CHRNA6Q15825 494 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 ZNF77Q15935 545 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 SLC5A12Q1EHB4 618 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 FAM74A3Q4VXF1 159 aa2.04□□□□□ -2.08
ATM-230ENST00000640388 C6orf226Q5I0X4 101 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms