RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MAS1P04201 325 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 CCL3P10147 92 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 GIFP27352 417 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF41P51814 821 aaPredicted RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 MAP2K6P52564 334 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SNTB2Q13425 540 aaKnown RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 PLPPR5Q32ZL2 321 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 BCL2L15Q5TBC7 163 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF468Q5VIY5 522 aaPredicted RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 KRT77Q7Z794 578 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 PIP4P1Q86T03 277 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 RPS19BP1Q86WX3 136 aaKnown RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 LIX1LQ8IVB5 337 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SERPINA12Q8IW75 414 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 DNAAF1Q8NEP3 725 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 OR2M3Q8NG83 312 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 OR5M1Q8NGP8 315 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 MIB2Q96AX9 1013 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 HAVCR1Q96D42 359 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SCMH1Q96GD3 660 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 ABHD6Q9BV23 337 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 FAM86C1Q9NVL1 165 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 DMXL1Q9Y485 3027 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 PRR33A8MZF0 331 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 NPIPA5E9PKD4 350 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 G3V3Y1 287 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 H3BML4 177 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 TP53I11O14683 189 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 PNPP00491 289 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 IFNGR1P15260 489 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 PTH2RP49190 550 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SSR4P51571 173 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 ART1P52961 327 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SCAND1P57086 179 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 MLF1P58340 268 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 TLE3Q04726 772 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 EIF2B1Q14232 305 aaKnown RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SLC25A53Q5H9E4 307 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM53Q6P2H8 277 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 MTFR2Q6P444 385 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 DNM1P34Q6PK57 102 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 OPN5Q6U736 354 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF454Q8N9F8 522 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 POC1BQ8TC44 478 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 CHST11Q9NPF2 352 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 NPIPA1Q9UND3 350 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 FOXJ3Q9UPW0 622 aa13.49□□□□□ -0.25
TRIM3-215ENST00000639856 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
TRIM3-215ENST00000639856 CNOT1A5YKK6 2376 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 H3BSH0 61 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 MPZL1O95297 269 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 CD63P08962 238 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 ERP29P30040 261 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 PTGS2P35354 604 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 RIDAP52758 137 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 RPS15P62841 145 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 C19orf57Q0VDD7 668 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 EIF3IQ13347 325 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 SSPNQ14714 243 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM164Q5U3C3 297 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 SLC26A10Q8NG04 563 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 OR52N5Q8NH56 324 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TSEN15Q8WW01 171 aaKnown RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 MRGPRX4Q96LA9 322 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 KCNK17Q96T54 332 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 POTEKPQ9BYX7 375 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 GHITMQ9H3K2 345 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 P4HTMQ9NXG6 502 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 KLHL9Q9P2J3 617 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 SLC22A13Q9Y226 551 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 BOLA1Q9Y3E2 137 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 ZNF292O60281 2723 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 MUC6Q6W4X9 2439 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 LIPT2A6NK58 231 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TNFSF15O95150 251 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 C1QBP02746 253 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 MT-ND4P03905 459 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 OPN1LWP04000 364 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 DLSTP36957 453 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 CCR6P51684 374 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 NUBP1P53384 320 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 RAG2P55895 527 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 HSF1Q00613 529 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 MAB21L1Q13394 359 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 NDUFA5Q16718 116 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM69Q5SWH9 247 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 FAM205BPQ63HN1 556 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 OR7E24Q6IFN5 339 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM156Q8N614 296 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 GCDHQ92947 438 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TRAF4Q9BUZ4 470 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-215ENST00000639856 TMEM185BQ9H7F4 350 aa13.48□□□□□ -0.25
TRIM3-215ENST00000639856 NIPAL2Q9H841 368 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms