RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 ELOVL3Q9HB03 270 aa13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 IL1RAPQ9NPH3 570 aa13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 NRIP3Q9NQ35 241 aa13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 POLE4Q9NR33 117 aa13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 MYEF2Q9P2K5 600 aaKnown RBP13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 IL20RAQ9UHF4 553 aa13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
CHRNA4-211ENST00000628606 SOCS2O14508 198 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 SLC16A7O60669 478 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 KHDRBS3O75525 346 aaKnown RBP13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 KRT36O76013 467 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 CLPTM1O96005 669 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 SEMG1P04279 462 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 IGHV4-31P0DP07 118 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 NAT2P11245 290 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 ZNF23P17027 643 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 ZNF26P17031 533 aaPredicted RBP13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 RRM2P31350 389 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 ARHGDIAP52565 204 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 CHN2P52757 468 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 ERVS71-1P61550 626 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 SCRN3Q0VDG4 424 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 MTX3Q5HYI7 312 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 CYP2R1Q6VVX0 501 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 HIPK1Q86Z02 1210 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 WNT5BQ9H1J7 359 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 SYT4Q9H2B2 425 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 HINT3Q9NQE9 182 aaKnown RBP13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
CHRNA4-211ENST00000628606 IGLV3-9A0A075B6K5 115 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 IGHV4-61A0A0C4DH41 118 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 LOC100289279A0A1B0GTE1 492 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 TPD52L2O43399 206 aaKnown RBP13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 IFNA2P01563 188 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 IGFBP1P08833 259 aaPredicted RBP13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CTLA4P16410 223 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CALB2P22676 271 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 NOS3P29474 1203 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CRABP1P29762 137 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 SLC6A6P31641 620 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CENPAP49450 140 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 PCGF3Q3KNV8 242 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 FAM166AQ6J272 317 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 ZNF774Q6NX45 483 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 DNM1P34Q6PK57 102 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 THSD4Q6ZMP0 1018 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 JAZF1Q86VZ6 243 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 GLB1L2Q8IW92 636 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 GNPDA2Q8TDQ7 276 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 RDH5Q92781 318 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 ERMAPQ96PL5 475 aaPredicted RBP13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 FUZQ9BT04 418 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 MUC13Q9H3R2 512 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CHODLQ9H9P2 273 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 EMC7Q9NPA0 242 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 CDC42EP3Q9UKI2 254 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 KCNS2Q9ULS6 477 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
CHRNA4-211ENST00000628606 PLSCR5A0PG75 271 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 C17orf100A8MU93 164 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 LYNX1G3V0Z9 82 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 SGCEO43556 437 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 DOK2O60496 412 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 LMX1BO60663 402 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 RENP00797 406 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 LYNX1P0DP58 116 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 ZNF16P17020 682 aaPredicted RBP13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 ACHEP22303 614 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 FPR3P25089 353 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 ENDOGQ14249 297 aaKnown RBP13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 RFX4Q33E94 735 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 UGT2A3Q6UWM9 527 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 ZER1Q7Z7L7 766 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 DHFR2Q86XF0 187 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 LINC00471Q8N535 108 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 ABHD4Q8TB40 342 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 C4orf45Q96LM5 186 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 IFT27Q9BW83 186 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 OR52D1Q9H346 318 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 DECR2Q9NUI1 292 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 TMEM160Q9NX00 188 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 VSX1Q9NZR4 365 aaPredicted RBP13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 LPAR3Q9UBY5 353 aa13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 COA3Q9Y2R0 106 aaPredicted RBP13.63□□□□□ -0.23
CHRNA4-211ENST00000628606 MALRD1Q5VYJ5 2156 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 TNFRSF11BO00300 401 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 IMPA2O14732 288 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PPP1R3DO95685 299 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 ABHD16AO95870 558 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 TXNDC12O95881 172 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 TGFAP01135 160 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 IGHV3-13P01766 116 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 HPXP02790 462 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 COX5BP10606 129 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 LIPAP38571 399 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 GPR6P46095 362 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms