RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SLC25A1P53007 311 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 LSM6P62312 80 aaKnown RBP12.4□□□□□ -0.42
CBWD3-217ENST00000621474 EFNB1P98172 346 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 HSF2Q03933 536 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 HGFACQ04756 655 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 GLO1Q04760 184 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PABPC1L2AQ5JQF8 200 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 DNM1P34Q6PK57 102 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 PAQR4Q8N4S7 273 aaPredicted RBP12.4□□□□□ -0.42
CBWD3-217ENST00000621474 CBR4Q8N4T8 237 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 STMN2Q93045 179 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 WNT5BQ9H1J7 359 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 UBTD1Q9HAC8 227 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 HINT3Q9NQE9 182 aaKnown RBP12.4□□□□□ -0.42
CBWD3-217ENST00000621474 LHFPL6Q9Y693 200 aa12.4□□□□□ -0.42
CBWD3-217ENST00000621474 USF3Q68DE3 2245 aa12.4□□□□□ -0.43
CBWD3-217ENST00000621474 MYO9AB2RTY4 2548 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ARID1AO14497 2285 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 RIIAD1A6NNX1 92 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 CRYAAP02489 173 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 CCL2P13500 99 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 GGT2P36268 569 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ALDH3A2P51648 485 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 CDH11P55287 796 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ELF3P78545 371 aaPredicted RBP12.39□□□□□ -0.43
CBWD3-217ENST00000621474 AQP6Q13520 282 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 DAG1Q14118 895 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 RCN1Q15293 331 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 SLX4IPQ5VYV7 408 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 C12orf73Q69YU5 71 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF611Q8N823 705 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 OR2T4Q8NH00 348 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 RNF121Q9H920 327 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 CISD1Q9NZ45 108 aaKnown RBP12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ASH2LQ9UBL3 628 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 ST6GALNAC2Q9UJ37 374 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 PLEKHA6Q9Y2H5 1048 aa12.39□□□□□ -0.43
CBWD3-217ENST00000621474 LOC100509620A0A075B734 347 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 M0R129 80 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 ATE1O95260 518 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 BAG2O95816 211 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 IFNGP01579 166 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 SOD3P08294 240 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 ANPEPP15144 967 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 CD53P19397 219 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 APEX1P27695 318 aaKnown RBP12.38□□□□□ -0.43
CBWD3-217ENST00000621474 GUCA1AP43080 201 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-217ENST00000621474 NKX6-1P78426 367 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF774Q6NX45 483 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 TMEM53Q6P2H8 277 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 PROKR2Q8NFJ6 384 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 FBXW5Q969U6 566 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 KCNN2Q9H2S1 579 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 TVP23BQ9NYZ1 205 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 COMMD3-BMI1R4GMX3 469 aa12.38□□□□□ -0.43
CBWD3-217ENST00000621474 C12orf71A8MTZ7 269 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 RER1O15258 196 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 PRKYO43930 277 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 HMGN1P05114 100 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SLC2A5P22732 501 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 RPS27P42677 84 aaKnown RBP12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CENPAP49450 140 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 TEKQ02763 1124 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CCDC92Q53HC0 331 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-217ENST00000621474 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 PLBD1Q6P4A8 553 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CDH24Q86UP0 819 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SLC30A7Q8NEW0 376 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 BBS1Q8NFJ9 593 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 POM121L2Q96KW2 1035 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 WACQ9BTA9 647 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 C9orf16Q9BUW7 83 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 WDR76Q9H967 626 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CYB5R1Q9UHQ9 305 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 FBXL3Q9UKT7 428 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
CBWD3-217ENST00000621474 TVP23AA6NH52 213 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 DLGAP1O14490 977 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SYNGR3O43761 229 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SNAP29O95721 258 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 CD8AP01732 235 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 PCBD1P61457 104 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SNAPC1Q16533 368 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 SLC18B1Q6NT16 456 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 C20orf204Q6ZNR8 217 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 VASH1Q7L8A9 365 aaPredicted RBP12.37□□□□□ -0.43
CBWD3-217ENST00000621474 LINC00346Q8IVM7 164 aa12.37□□□□□ -0.43
CBWD3-217ENST00000621474 ZNF511Q8NB15 262 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms