RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	SLC16A1	P53985	500 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BD	P58876	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BC	P62807	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST2H2BE	Q16778	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	DCAF10	Q5QP82	559 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	TANGO2	Q6ICL3	276 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF529	Q6P280	563 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	C5orf24	Q7Z6I8	188 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	TRAM1L1	Q8N609	369 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF740	Q8NDX6	193 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BH	Q93079	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	MR1	Q95460	341 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BN	Q99877	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HIST1H2BM	Q99879	126 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SLC17A9	Q9BYT1	436 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SLC6A16	Q9GZN6	736 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	SPACA1	Q9HBV2	294 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	PARP11	Q9NR21	331 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	DEC1	Q9P2X7	70 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	FBXO4	Q9UKT5	387 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.49	□□□□□ -0.73
TP53-222	ENST00000617185	HDGFL3	Q9Y3E1	203 aa		10.49	□□□□□ -0.73
TP53-222	ENST00000617185	KCNAB3	O43448	404 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PRICKLE3	O43900	615 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	HLA-A	P01891	365 aa	Known RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ST6GAL1	P15907	406 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PSMB6	P28072	239 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	DHPS	P49366	369 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ACTC1	P68032	377 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ACTA1	P68133	377 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PRSS53	Q2L4Q9	553 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ISX	Q2M1V0	245 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF674	Q2M3X9	581 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	TMEM35A	Q53FP2	167 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF311	Q5JNZ3	666 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	C9orf64	Q5T6V5	341 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	STPG1	Q5TH74	334 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	GFI1B	Q5VTD9	330 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF585A	Q6P3V2	769 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	TTLL10	Q6ZVT0	673 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	TM4SF18	Q96CE8	201 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	SAMD8	Q96LT4	415 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	RAB33B	Q9H082	229 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	SLC25A18	Q9H1K4	315 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	P2RX2	Q9UBL9	471 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	SLC23A2	Q9UGH3	650 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	CSAG2	Q9Y5P2	127 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	GON4L	Q3T8J9	2241 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PAPLN	O95428	1278 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	TGFB1	P01137	390 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	STATH	P02808	62 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	GPR4	P46093	362 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	RPS23	P62266	143 aa	Known RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	ST3GAL3	Q11203	375 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	JOSD1	Q15040	202 aa	Predicted RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	UBE2V2	Q15819	145 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	SYPL1	Q16563	259 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PLEKHS1	Q5SXH7	462 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	PIP5KL1	Q5T9C9	394 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	OR8S1	Q8NH09	359 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	WDR92	Q96MX6	357 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	RPP25	Q9BUL9	199 aa	Known RBP	10.48	□□□□□ -0.73
TP53-222	ENST00000617185	LGR4	Q9BXB1	951 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	SYNPO2L	Q9H987	977 aa		10.48	□□□□□ -0.73
TP53-222	ENST00000617185	TRBV6-7	A0A0A0MS04	114 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	TRBV2	A0A0J9YWF9	115 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185		C9J4A7	227 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SLC16A5	O15375	505 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	LINC01565	O15544	149 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	GMFG	O60234	142 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	PCCB	P05166	539 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	TMIGD3	P0DMS9	266 aa	Predicted RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	NR2F1	P10589	423 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	TMEM11	P17152	192 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	PPP2R1B	P30154	601 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	BUD31	P41223	144 aa	Predicted RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	TDGF1P3	P51864	188 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SEC13	P55735	322 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	KHDRBS2	Q5VWX1	349 aa	Known RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	PSRC1	Q6PGN9	363 aa	Predicted RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	UBE3D	Q7Z6J8	389 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	ZNF547	Q8IVP9	402 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	NTNG2	Q96CW9	530 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	KCNG2	Q9UJ96	466 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	LRRK1	Q38SD2	2015 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	DVL1	O14640	695 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SLCO2B1	O94956	709 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	EPPIN	O95925	133 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	RPN2	P04844	631 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SERPINA5	P05154	406 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	CD1A	P06126	327 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SULT1A2	P50226	295 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	TBPL1	P62380	186 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SIRPA	P78324	504 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	SSBP1	Q04837	148 aa	Known RBP	10.47	□□□□□ -0.73
TP53-222	ENST00000617185	GAB4	Q2WGN9	574 aa		10.47	□□□□□ -0.73
TP53-222	ENST00000617185	MMP21	Q8N119	569 aa		10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms