RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 GPANK1O95872 356 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 GABRA3P34903 492 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 LCN6P62502 163 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 MAMDC2Q7Z304 686 aaPredicted RBP12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 SFXN5Q8TD22 340 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 GLIPR2Q9H4G4 154 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 CMC2Q9NRP2 79 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 TMEM14AQ9Y6G1 99 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF860A6NHJ4 632 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 DPY19L4Q7Z388 723 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 G6PC3Q9BUM1 346 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 KCND3Q9UK17 655 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 HSF4Q9ULV5 492 aa12.37□□□□□ -0.43
PPP4R3B-205ENST00000616288 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 TMEM11P17152 192 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 RCC1P18754 421 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF10P21506 573 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 CXCR1P25024 350 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ACKR3P25106 362 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 TMEM244Q5VVB8 128 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 OTPQ5XKR4 325 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 TXNDC8Q6A555 127 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 APCDD1Q8J025 514 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 CSNK1A1LQ8N752 337 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 SCGB1C1Q8TD33 95 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 NOL4LQ96MY1 436 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 UBQLN4Q9NRR5 601 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 TRAPPC6AO75865 159 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 SPINT3P49223 89 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 POLR2HP52434 150 aaKnown RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 MCEMP1Q8IX19 187 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 CARFQ8N187 725 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZFP62Q8NB50 900 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 OR2G3Q8NGZ4 309 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ALG12Q9BV10 488 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 EXOGQ9Y2C4 368 aaKnown RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 TAAR5O14804 337 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 HRH1P35367 487 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 IKZF1Q13422 519 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 RAB32Q13637 225 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 HNF4GQ14541 408 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 AGERQ15109 404 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 OR4C11Q6IEV9 310 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 OPN5Q6U736 354 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 MR1Q95460 341 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 PPP1R14DQ9NXH3 145 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 EHFQ9NZC4 300 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF443Q9Y2A4 671 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 A0A1W2PPQ1 181 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 FCMRO60667 390 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 IFNA5P01569 189 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 MBPP02686 304 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 H2AFB1P0C5Y9 115 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 MST1P26927 711 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 RING1Q06587 406 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF345Q14585 488 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 ATPAF1Q5TC12 328 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 KCTD18Q6PI47 426 aaPredicted RBP12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 METTL21AQ8WXB1 218 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 WBP1Q96G27 269 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 DKKL1Q9UK85 242 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 SLC7A11Q9UPY5 501 aa12.36□□□□□ -0.43
PPP4R3B-205ENST00000616288 PEX12O00623 359 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 DNAJB6O75190 326 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 GALTP07902 379 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 RAE1P78406 368 aaKnown RBP12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 C11orf42Q8N5U0 333 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 TCTN2Q96GX1 697 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 CCNL2Q96S94 520 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 ZNF426Q9BUY5 554 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 TEX101Q9BY14 249 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 SFXN1Q9H9B4 322 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 PRSS16Q9NQE7 514 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 GPR55Q9Y2T6 319 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 COL2A1P02458 1487 aaPredicted RBP12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 RAB27BO00194 218 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 CRHP06850 196 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 TYRP1P17643 537 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 KHDC3LQ587J8 217 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 DCAF4L2Q8NA75 395 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 GMLQ99445 158 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 TMEM189-UBE2V1I3L0A0 370 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 PRPH2P23942 346 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 CTHP32929 405 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 TNFRSF9Q07011 255 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 ARSIQ5FYB1 569 aa12.35□□□□□ -0.43
PPP4R3B-205ENST00000616288 MRPL2Q5T653 305 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms