RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 MAKP20794 623 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PEBP1P30086 187 aaKnown RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 AP3S2P59780 193 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TRA2BP62995 288 aaKnown RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 RNF4P78317 190 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 METAP1DQ6UB28 335 aaPredicted RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SLC7A13Q8TCU3 470 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 HAVCR2Q8TDQ0 301 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SEC22AQ96IW7 307 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 C10orf90Q96M02 699 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PITHD1Q9GZP4 211 aaPredicted RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SYNPO2LQ9H987 977 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TMEM45AQ9NWC5 275 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 IL17BQ9UHF5 180 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PLXNA4Q9HCM2 1894 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TMED7-TICAM2A0A0A6YYA0 188 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 IRGMA1A4Y4 181 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SULT1B1O43704 296 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PSMB1P20618 241 aaKnown RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 EIF2S3P41091 472 aaKnown RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 LSM11P83369 360 aaKnown RBP eCLIP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 DEFA6Q01524 100 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SEC23BQ15437 767 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 Q6ZTK2 550 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ROBO4Q8WZ75 1007 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 RASD2Q96D21 266 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ORAI1Q96D31 301 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 HS6ST2Q96MM7 605 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 IER2Q9BTL4 223 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 WDR76Q9H967 626 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PTTG3PQ9NZH4 202 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TMED7Q9Y3B3 224 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 PRODHO43272 600 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 RGS9O75916 674 aaPredicted RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 CYB5AP00167 134 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 POU2F2P09086 479 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 CPEP16870 476 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 LUMP51884 338 aaPredicted RBP9.84□□□□□ -0.83
FAM3A-221ENST00000612856 FOXK1P85037 733 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 C17orf67Q0P5P2 114 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 DOC2BQ14184 412 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TSC22D1Q15714 1073 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 SCGB2B2Q4G0G5 96 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 NKAPLQ5M9Q1 402 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 H3F3CQ6NXT2 135 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 CBLN3Q6UW01 205 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 UNQ6126/PRO20091Q6UXV3 157 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TMEM41AQ96HV5 264 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 MESP1Q9BRJ9 268 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 ZGRF1Q86YA3 2104 aa9.84□□□□□ -0.83
FAM3A-221ENST00000612856 TRBV2A0A0J9YWF9 115 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 IGF2P01344 180 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CSF2RBP32927 897 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 BIDP55957 195 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CARD18P57730 90 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 PRSS53Q2L4Q9 553 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ISXQ2M1V0 245 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 MPEG1Q2M385 716 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SFXN4Q6P4A7 337 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 NDUFAF7Q7L592 441 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF546Q86UE3 836 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 FOXRED2Q8IWF2 684 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CA5BP1Q8WTZ4 195 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ACOT11Q8WXI4 607 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 THAP4Q8WY91 577 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SLC39A7Q92504 469 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 NAA11Q9BSU3 229 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SLC25A18Q9H1K4 315 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 MIOXQ9UGB7 285 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 KIF25Q9UIL4 384 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 C19orf53Q9UNZ5 99 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 C13orf42A0A1B0GVH6 325 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 AIPO00170 330 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 FADS1O60427 444 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 TIAF1O95411 115 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CSTBP04080 98 aaKnown RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 NMBP08949 121 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 PRSS12P56730 875 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SEC61A1P61619 476 aaKnown RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 RBMS2Q15434 407 aaKnown RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 INPP5JQ15735 1006 aaPredicted RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 AVPI1Q5T686 147 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM91Q6ZNR0 172 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 AAED1Q7RTV5 226 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 BEST3Q8N1M1 668 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 SVBPQ8N300 66 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 BVESQ8NE79 360 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 BPIFCQ8NFQ6 507 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 OR13C5Q8NGS8 318 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 CASTOR1Q8WTX7 329 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 PNPLA2Q96AD5 504 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 NOP16Q9Y3C1 178 aaKnown RBP9.83□□□□□ -0.84
FAM3A-221ENST00000612856 MMACHCQ9Y4U1 282 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 ASB4Q9Y574 426 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 KCNMB2Q9Y691 235 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 FER1L5A0AVI2 2057 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 MYO15AQ9UKN7 3530 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 A0A1W2PPV9 198 aa9.83□□□□□ -0.84
FAM3A-221ENST00000612856 LILRB5O75023 590 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms